RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 NBPF14Q5TI25 921 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 LDHAL6AQ6ZMR3 332 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 GPR162Q16538 588 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 PICK1Q9NRD5 415 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 AMOTQ4VCS5 1084 aa18.48■□□□□ 0.55
CACNA1A-258ENST00000638029 MCM6Q14566 821 aa18.47■□□□□ 0.55
CACNA1A-258ENST00000638029 IFRD2Q12894 506 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-258ENST00000638029 SPDYE3A6NKU9 549 aa18.47■□□□□ 0.55
CACNA1A-258ENST00000638029 FAM47CQ5HY64 1035 aa18.47■□□□□ 0.55
CACNA1A-258ENST00000638029 ZEB2O60315 1214 aa18.47■□□□□ 0.55
CACNA1A-258ENST00000638029 FMNL3Q8IVF7 1028 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 PPP1R42Q7Z4L9 355 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 IFT81Q8WYA0 676 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 SCAND2PQ9GZW5 306 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 FOXD4Q12950 439 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 RNF169Q8NCN4 708 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 CTAGE5O15320 804 aa18.46■□□□□ 0.55
CACNA1A-258ENST00000638029 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 SH2B1Q9NRF2 756 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 SORBS3O60504 671 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 NSRP1Q9H0G5 558 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 TLDC2A0PJX2 215 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 SELENOOQ9BVL4 669 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 CRNKL1Q9BZJ0 848 aaKnown RBP18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 PPP1R7Q15435 360 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 CHMP6Q96FZ7 201 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 RASAL2Q9UJF2 1139 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 C10orf67Q8IYJ2 551 aa18.45■□□□□ 0.54
CACNA1A-258ENST00000638029 MCM4P33991 863 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 SKAP1Q86WV1 359 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 ANKS4BQ8N8V4 417 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GOLGA1Q92805 767 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 NOP56O00567 594 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 SNW1Q13573 536 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 PLIN2Q99541 437 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 SUDS3Q9H7L9 328 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 KSR1Q8IVT5 923 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 SKA2Q8WVK7 121 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 CEP85LQ5SZL2 805 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 ERMNQ8TAM6 284 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 DDX27Q96GQ7 796 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GOLGA6CA6NDK9 693 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GOLGA6BA6NDN3 693 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GOLGA6DP0CG33 693 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 LCA5Q86VQ0 697 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GOLGA6AQ9NYA3 693 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 GIPC1O14908 333 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 USP25Q9UHP3 1055 aa18.44■□□□□ 0.54
CACNA1A-258ENST00000638029 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 B4DLN1 442 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 SFMBT1Q9UHJ3 866 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 METAP2P50579 478 aaKnown RBP eCLIP18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 KIF14Q15058 1648 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 IGF1RP08069 1367 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 PLVAPQ9BX97 442 aa18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 DCAF17Q5H9S7 520 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-258ENST00000638029 GNG11P61952 73 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 PRR16Q569H4 304 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 TMTC4Q5T4D3 741 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 SAP30BPQ9UHR5 308 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 ZNF830Q96NB3 372 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 IFI16Q16666 785 aaKnown RBP18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 F6X3S4 739 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 SH2D4BQ5SQS7 431 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 USP37Q86T82 979 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 CCDC172P0C7W6 258 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 NAPAP54920 295 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 GSTO1P78417 241 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 TMOD4Q9NZQ9 345 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
CACNA1A-258ENST00000638029 UBLCP1Q8WVY7 318 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 CHMP2AO43633 222 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 CHST3Q7LGC8 479 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 PARD3BQ8TEW8 1205 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 SPAG5Q96R06 1193 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 LDHCP07864 332 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 PDCD7Q8N8D1 485 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 CYP7A1P22680 504 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 RNASE9P60153 205 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 RRAGBQ5VZM2 374 aa18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 VIMP08670 466 aaKnown RBP18.41■□□□□ 0.54
CACNA1A-258ENST00000638029 AKR1B10O60218 316 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 IGSF3O75054 1194 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 VGLL3A8MV65 326 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 N4BP3O15049 544 aa18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
CACNA1A-258ENST00000638029 SLC8A3P57103 927 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms