RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 PLIN2Q99541 437 aa18.29■□□□□ 0.52
CLN5-208ENST00000636183 TCP10Q12799 353 aa18.29■□□□□ 0.52
CLN5-208ENST00000636183 RNF187Q5TA31 235 aaPredicted RBP18.29■□□□□ 0.52
CLN5-208ENST00000636183 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
CLN5-208ENST00000636183 PTPN14Q15678 1187 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 GBP3Q9H0R5 595 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 CDK13Q14004 1512 aaKnown RBP18.28■□□□□ 0.52
CLN5-208ENST00000636183 DDX39AO00148 427 aaKnown RBP18.28■□□□□ 0.52
CLN5-208ENST00000636183 CPXCR1Q8N123 301 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 MAK16Q9BXY0 300 aaKnown RBP18.28■□□□□ 0.52
CLN5-208ENST00000636183 ARHGEF10LQ9HCE6 1279 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
CLN5-208ENST00000636183 PFDN4Q9NQP4 134 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 GOLGA1Q92805 767 aa18.28■□□□□ 0.52
CLN5-208ENST00000636183 NBPF3Q9H094 633 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 RMND1Q9NWS8 449 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 KRT5P13647 590 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 IFI16Q16666 785 aaKnown RBP18.27■□□□□ 0.52
CLN5-208ENST00000636183 PLVAPQ9BX97 442 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 N4BP3O15049 544 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 MSANTD4Q8NCY6 345 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 SLC8A3P57103 927 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
CLN5-208ENST00000636183 ABT1Q9ULW3 272 aaKnown RBP18.27■□□□□ 0.52
CLN5-208ENST00000636183 AKR1B10O60218 316 aa18.27■□□□□ 0.51
CLN5-208ENST00000636183 MXRA7P84157 204 aa18.27■□□□□ 0.51
CLN5-208ENST00000636183 BIRC3Q13489 604 aa18.27■□□□□ 0.51
CLN5-208ENST00000636183 SLFN5Q08AF3 891 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 SORBS3O60504 671 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 GAS8O95995 478 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 PPP2R5CQ13362 524 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 TMTC2Q8N394 836 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 NOS1P29475 1434 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 KRT79Q5XKE5 535 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 FAM169AQ9Y6X4 670 aa18.26■□□□□ 0.51
CLN5-208ENST00000636183 MCM7P33993 719 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 CFAP58Q5T655 872 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 GDPD2Q9HCC8 539 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 CCDC183Q5T5S1 534 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 NOC2LQ9Y3T9 749 aaKnown RBP18.25■□□□□ 0.51
CLN5-208ENST00000636183 KRT9P35527 623 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 GEN1Q17RS7 908 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 FNBP1Q96RU3 617 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 CSADQ9Y600 493 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 DAPK3O43293 454 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 GADL1Q6ZQY3 521 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
CLN5-208ENST00000636183 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 BRF1Q92994 677 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 CRCPO75575 148 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 PARP1P09874 1014 aaKnown RBP18.24■□□□□ 0.51
CLN5-208ENST00000636183 TTC6Q86TZ1 520 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 PRPF31Q8WWY3 499 aaKnown RBP18.24■□□□□ 0.51
CLN5-208ENST00000636183 AKAP4Q5JQC9 854 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 SMC1BQ8NDV3 1235 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 CTAGE5O15320 804 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 ZFYP08048 801 aaPredicted RBP18.24■□□□□ 0.51
CLN5-208ENST00000636183 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 KIFC2Q96AC6 838 aa18.24■□□□□ 0.51
CLN5-208ENST00000636183 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 MCM3P25205 808 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 CLSTN2Q9H4D0 955 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 PTGS1P23219 599 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 HS2ST1Q7LGA3 356 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 NECAB1Q8N987 351 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 TCEANC2Q96MN5 208 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 GRM8O00222 908 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 ZBED4O75132 1171 aa18.23■□□□□ 0.51
CLN5-208ENST00000636183 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 SYKP43405 635 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 DCAF17Q5H9S7 520 aaPredicted RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 CCDC65Q8IXS2 484 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 GIMAP7Q8NHV1 300 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 GSDMBQ8TAX9 411 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 CCT6BQ92526 530 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 ATP2C2O75185 946 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 MARCKSP29966 332 aaPredicted RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 HOOK2Q96ED9 719 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 AZI2Q9H6S1 392 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 PA2G4Q9UQ80 394 aaKnown RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 BBXQ8WY36 941 aaPredicted RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 DHX58Q96C10 678 aa18.22■□□□□ 0.51
CLN5-208ENST00000636183 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
CLN5-208ENST00000636183 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.51
CLN5-208ENST00000636183 TTLL3Q9Y4R7 772 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms