RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 CNNM2Q9H8M5 875 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 IQSEC2Q5JU85 1478 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 PDE4CQ08493 712 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
CNOT3-210ENST00000618939 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-210ENST00000618939 CCDC152Q4G0S7 254 aa16.04■□□□□ 0.16
CNOT3-210ENST00000618939 CGNQ9P2M7 1197 aaKnown RBP16.04■□□□□ 0.16
CNOT3-210ENST00000618939 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
CNOT3-210ENST00000618939 MTMR6Q9Y217 621 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
CNOT3-210ENST00000618939 BRAPQ7Z569 592 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 NCOA5Q9HCD5 579 aaKnown RBP16.03■□□□□ 0.16
CNOT3-210ENST00000618939 JAK2O60674 1132 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 NLRP5P59047 1200 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 RTN1Q16799 776 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 AK7Q96M32 723 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
CNOT3-210ENST00000618939 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
CNOT3-210ENST00000618939 HELBQ8NG08 1087 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-210ENST00000618939 TCEAL9Q9UHQ7 104 aa16.02■□□□□ 0.16
CNOT3-210ENST00000618939 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.16
CNOT3-210ENST00000618939 TMCO3Q6UWJ1 677 aa16.02■□□□□ 0.16
CNOT3-210ENST00000618939 CLSTN2Q9H4D0 955 aa16.02■□□□□ 0.16
CNOT3-210ENST00000618939 ERLIN1O75477 346 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 UBASH3AP57075 661 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 FAM160A1Q05DH4 1040 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 TMTC2Q8N394 836 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 PRDM10Q9NQV6 1147 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.15
CNOT3-210ENST00000618939 TSPOAP1O95153 1857 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 CYP7A1P22680 504 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 EIF5P55010 431 aaKnown RBP16.02■□□□□ 0.15
CNOT3-210ENST00000618939 KANK3Q6NY19 840 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.15
CNOT3-210ENST00000618939 ARHGEF40Q8TER5 1519 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 PTPRMP28827 1452 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 ZPR1O75312 459 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 PHKG2P15735 406 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-210ENST00000618939 DEF6Q9H4E7 631 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 LMOD1P29536 600 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-210ENST00000618939 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
CNOT3-210ENST00000618939 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 ZNF287Q9HBT7 754 aa16.01■□□□□ 0.15
CNOT3-210ENST00000618939 ADCK5Q3MIX3 580 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 ESR2Q92731 530 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 A0A1B0GVL5 298 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 APPBP2Q92624 585 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 XAGE2Q96GT9 111 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 CCDC194A0A1B0GVG4 234 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 RXRAP19793 462 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
CNOT3-210ENST00000618939 NEXMIFQ5QGS0 1516 aa16■□□□□ 0.15
CNOT3-210ENST00000618939 KIF5CO60282 957 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 DDX17Q92841 729 aaKnown RBP15.99■□□□□ 0.15
CNOT3-210ENST00000618939 GTF3C6Q969F1 213 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 TANGO6Q9C0B7 1094 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 CASQ1P31415 396 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 ZNF444Q8N0Y2 327 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-210ENST00000618939 MAP4K1Q92918 833 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 CBX8Q9HC52 389 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 CTDP1Q9Y5B0 961 aaPredicted RBP15.99■□□□□ 0.15
CNOT3-210ENST00000618939 TSPY2A6NKD2 308 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 SSBP05455 408 aaKnown RBP eCLIP15.99■□□□□ 0.15
CNOT3-210ENST00000618939 POLA2Q14181 598 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
CNOT3-210ENST00000618939 NAA16Q6N069 864 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-210ENST00000618939 ZHX3Q9H4I2 956 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 COPRSQ9NQ92 184 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 KIF4BQ2VIQ3 1234 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 PKNOX2Q96KN3 472 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 SEC62Q99442 399 aaKnown RBP15.98■□□□□ 0.15
CNOT3-210ENST00000618939 GPAA1O43292 621 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 KIF5BP33176 963 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 MAGEB6Q8N7X4 407 aa15.98■□□□□ 0.15
CNOT3-210ENST00000618939 BMP2KQ9NSY1 1161 aaPredicted RBP15.98■□□□□ 0.15
CNOT3-210ENST00000618939 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 KIF2CQ99661 725 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 DSCC1Q9BVC3 393 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 SEC63Q9UGP8 760 aaKnown RBP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 GOLGA6L9A6NEM1 432 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 ITGA6P23229 1130 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 PDE4BQ07343 736 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 KIAA1328Q86T90 577 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 ANKRD18AQ8IVF6 992 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 C17orf53Q8N3J3 647 aaPredicted RBP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 PI4K2BQ8TCG2 481 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 OTUD7BQ6GQQ9 843 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
CNOT3-210ENST00000618939 LUC7LQ9NQ29 371 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms