RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
TUBE1-208ENST00000604743 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
TUBE1-208ENST00000604743 TRPM4Q8TD43 1214 aa18.06■□□□□ 0.48
TUBE1-208ENST00000604743 MEIS3Q99687 375 aa18.06■□□□□ 0.48
TUBE1-208ENST00000604743 COA1Q9GZY4 146 aa18.06■□□□□ 0.48
TUBE1-208ENST00000604743 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
TUBE1-208ENST00000604743 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
TUBE1-208ENST00000604743 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
TUBE1-208ENST00000604743 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 SAMD7Q7Z3H4 446 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 DPF2Q92785 391 aa18.05■□□□□ 0.48
TUBE1-208ENST00000604743 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-208ENST00000604743 HIRAP54198 1017 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-208ENST00000604743 TBC1D10BQ4KMP7 808 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-208ENST00000604743 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-208ENST00000604743 MXD3Q9BW11 206 aa18.04■□□□□ 0.48
TUBE1-208ENST00000604743 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
TUBE1-208ENST00000604743 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
TUBE1-208ENST00000604743 HDAC5Q9UQL6 1122 aa18.03■□□□□ 0.48
TUBE1-208ENST00000604743 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
TUBE1-208ENST00000604743 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 PASKQ96RG2 1323 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 EGFRP00533 1210 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 GNAI3P08754 354 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 GTF2IP78347 998 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 TTLL5Q6EMB2 1281 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 AGBL3Q8NEM8 1001 aa18.02■□□□□ 0.48
TUBE1-208ENST00000604743 ZNF646O15015 1829 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-208ENST00000604743 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-208ENST00000604743 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
TUBE1-208ENST00000604743 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
TUBE1-208ENST00000604743 ZNF804AQ7Z570 1209 aa18.01■□□□□ 0.47
TUBE1-208ENST00000604743 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
TUBE1-208ENST00000604743 SIL1Q9H173 461 aa18.01■□□□□ 0.47
TUBE1-208ENST00000604743 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
TUBE1-208ENST00000604743 IRS2Q9Y4H2 1338 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 TRAF5O00463 557 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
TUBE1-208ENST00000604743 UBE4AQ14139 1066 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 KIF4BQ2VIQ3 1234 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 STRIP1Q5VSL9 837 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 C15orf52Q6ZUT6 534 aaKnown RBP18■□□□□ 0.47
TUBE1-208ENST00000604743 DNAJC5GQ8N7S2 189 aa18■□□□□ 0.47
TUBE1-208ENST00000604743 EYA2O00167 538 aa17.99■□□□□ 0.47
TUBE1-208ENST00000604743 USP17L8P0C7I0 530 aa17.99■□□□□ 0.47
TUBE1-208ENST00000604743 GYG1P46976 350 aa17.99■□□□□ 0.47
TUBE1-208ENST00000604743 GMLQ99445 158 aa17.99■□□□□ 0.47
TUBE1-208ENST00000604743 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
TUBE1-208ENST00000604743 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
TUBE1-208ENST00000604743 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
TUBE1-208ENST00000604743 PDE8BO95263 885 aa17.98■□□□□ 0.47
TUBE1-208ENST00000604743 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
TUBE1-208ENST00000604743 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
TUBE1-208ENST00000604743 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
TUBE1-208ENST00000604743 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
TUBE1-208ENST00000604743 GNAI2P04899 355 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 IL1R1P14778 569 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 HIBADHP31937 336 aaKnown RBP17.97■□□□□ 0.47
TUBE1-208ENST00000604743 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 PGAP2Q9UHJ9 254 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 MYO3BQ8WXR4 1341 aa17.97■□□□□ 0.47
TUBE1-208ENST00000604743 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 RLBP1P12271 317 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
TUBE1-208ENST00000604743 ATG9AQ7Z3C6 839 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 VPS37DQ86XT2 251 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 DCPSQ96C86 337 aaKnown RBP17.96■□□□□ 0.47
TUBE1-208ENST00000604743 FAM84BQ96KN1 310 aaPredicted RBP17.96■□□□□ 0.47
TUBE1-208ENST00000604743 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
TUBE1-208ENST00000604743 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
TUBE1-208ENST00000604743 ASTN2O75129 1339 aaPredicted RBP17.96■□□□□ 0.46
TUBE1-208ENST00000604743 SCARF1Q14162 830 aa17.95■□□□□ 0.46
TUBE1-208ENST00000604743 DLK2Q6UY11 383 aa17.95■□□□□ 0.46
TUBE1-208ENST00000604743 CDC37L1Q7L3B6 337 aa17.95■□□□□ 0.46
TUBE1-208ENST00000604743 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
TUBE1-208ENST00000604743 ABT1Q9ULW3 272 aaKnown RBP17.95■□□□□ 0.46
TUBE1-208ENST00000604743 IQSEC3Q9UPP2 1182 aaPredicted RBP17.95■□□□□ 0.46
TUBE1-208ENST00000604743 ZNF609O15014 1411 aa17.95■□□□□ 0.46
TUBE1-208ENST00000604743 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
TUBE1-208ENST00000604743 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
TUBE1-208ENST00000604743 PUM3Q15397 648 aaKnown RBP17.94■□□□□ 0.46
TUBE1-208ENST00000604743 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
TUBE1-208ENST00000604743 KRT26Q7Z3Y9 468 aa17.94■□□□□ 0.46
TUBE1-208ENST00000604743 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
TUBE1-208ENST00000604743 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
TUBE1-208ENST00000604743 GGA3Q9NZ52 723 aa17.94■□□□□ 0.46
TUBE1-208ENST00000604743 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
TUBE1-208ENST00000604743 CIAO1O76071 339 aa17.93■□□□□ 0.46
TUBE1-208ENST00000604743 CELF2O95319 508 aaKnown RBP17.93■□□□□ 0.46
TUBE1-208ENST00000604743 ANGEL2Q5VTE6 544 aaKnown RBP17.93■□□□□ 0.46
TUBE1-208ENST00000604743 CERS5Q8N5B7 392 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms