RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 RBM26Q5T8P6 1007 aaKnown RBP18.06■□□□□ 0.48
TUBE1-204ENST00000603621 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
TUBE1-204ENST00000603621 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
TUBE1-204ENST00000603621 TRPM4Q8TD43 1214 aa18.06■□□□□ 0.48
TUBE1-204ENST00000603621 MEIS3Q99687 375 aa18.06■□□□□ 0.48
TUBE1-204ENST00000603621 COA1Q9GZY4 146 aa18.06■□□□□ 0.48
TUBE1-204ENST00000603621 LRRFIP2Q9Y608 721 aaKnown RBP18.06■□□□□ 0.48
TUBE1-204ENST00000603621 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
TUBE1-204ENST00000603621 USP17L3A6NCW0 530 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 USP17L4A6NCW7 530 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
TUBE1-204ENST00000603621 LRRC24Q50LG9 513 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 USP17L1Q7RTZ2 530 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 SAMD7Q7Z3H4 446 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 DPF2Q92785 391 aa18.05■□□□□ 0.48
TUBE1-204ENST00000603621 ITGBL1O95965 494 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-204ENST00000603621 HIRAP54198 1017 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-204ENST00000603621 TBC1D10BQ4KMP7 808 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-204ENST00000603621 RSBN1LQ6PCB5 846 aaPredicted RBP18.04■□□□□ 0.48
TUBE1-204ENST00000603621 MXD3Q9BW11 206 aa18.04■□□□□ 0.48
TUBE1-204ENST00000603621 METTL24Q5JXM2 366 aa18.03■□□□□ 0.48
TUBE1-204ENST00000603621 CD209Q9NNX6 404 aa18.03■□□□□ 0.48
TUBE1-204ENST00000603621 HDAC5Q9UQL6 1122 aa18.03■□□□□ 0.48
TUBE1-204ENST00000603621 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
TUBE1-204ENST00000603621 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 PASKQ96RG2 1323 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 EGFRP00533 1210 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 GNAI3P08754 354 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 GTF2IP78347 998 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 TTLL5Q6EMB2 1281 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 AGBL3Q8NEM8 1001 aa18.02■□□□□ 0.48
TUBE1-204ENST00000603621 ZNF646O15015 1829 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-204ENST00000603621 RFX5P48382 616 aaPredicted RBP18.01■□□□□ 0.47
TUBE1-204ENST00000603621 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
TUBE1-204ENST00000603621 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
TUBE1-204ENST00000603621 ZNF804AQ7Z570 1209 aa18.01■□□□□ 0.47
TUBE1-204ENST00000603621 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
TUBE1-204ENST00000603621 SIL1Q9H173 461 aa18.01■□□□□ 0.47
TUBE1-204ENST00000603621 TRPM7Q96QT4 1865 aa18.01■□□□□ 0.47
TUBE1-204ENST00000603621 IRS2Q9Y4H2 1338 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 TRAF5O00463 557 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
TUBE1-204ENST00000603621 UBE4AQ14139 1066 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 KIF4BQ2VIQ3 1234 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 STRIP1Q5VSL9 837 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 C15orf52Q6ZUT6 534 aaKnown RBP18■□□□□ 0.47
TUBE1-204ENST00000603621 DNAJC5GQ8N7S2 189 aa18■□□□□ 0.47
TUBE1-204ENST00000603621 EYA2O00167 538 aa17.99■□□□□ 0.47
TUBE1-204ENST00000603621 USP17L8P0C7I0 530 aa17.99■□□□□ 0.47
TUBE1-204ENST00000603621 GYG1P46976 350 aa17.99■□□□□ 0.47
TUBE1-204ENST00000603621 GMLQ99445 158 aa17.99■□□□□ 0.47
TUBE1-204ENST00000603621 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
TUBE1-204ENST00000603621 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
TUBE1-204ENST00000603621 TMEM88BA6NKF7 163 aa17.98■□□□□ 0.47
TUBE1-204ENST00000603621 PDE8BO95263 885 aa17.98■□□□□ 0.47
TUBE1-204ENST00000603621 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
TUBE1-204ENST00000603621 ZC3H15Q8WU90 426 aaKnown RBP17.98■□□□□ 0.47
TUBE1-204ENST00000603621 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
TUBE1-204ENST00000603621 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
TUBE1-204ENST00000603621 GNAI2P04899 355 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 IL1R1P14778 569 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 HIBADHP31937 336 aaKnown RBP17.97■□□□□ 0.47
TUBE1-204ENST00000603621 ITPRIPQ8IWB1 547 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 PGAP2Q9UHJ9 254 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 MYO3BQ8WXR4 1341 aa17.97■□□□□ 0.47
TUBE1-204ENST00000603621 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 RLBP1P12271 317 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
TUBE1-204ENST00000603621 ATG9AQ7Z3C6 839 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 VPS37DQ86XT2 251 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 DCPSQ96C86 337 aaKnown RBP17.96■□□□□ 0.47
TUBE1-204ENST00000603621 FAM84BQ96KN1 310 aaPredicted RBP17.96■□□□□ 0.47
TUBE1-204ENST00000603621 ZNF408Q9H9D4 720 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 MYOZ2Q9NPC6 264 aa17.96■□□□□ 0.47
TUBE1-204ENST00000603621 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
TUBE1-204ENST00000603621 ASTN2O75129 1339 aaPredicted RBP17.96■□□□□ 0.46
TUBE1-204ENST00000603621 SCARF1Q14162 830 aa17.95■□□□□ 0.46
TUBE1-204ENST00000603621 DLK2Q6UY11 383 aa17.95■□□□□ 0.46
TUBE1-204ENST00000603621 CDC37L1Q7L3B6 337 aa17.95■□□□□ 0.46
TUBE1-204ENST00000603621 OGFOD1Q8N543 542 aa17.95■□□□□ 0.46
TUBE1-204ENST00000603621 ABT1Q9ULW3 272 aaKnown RBP17.95■□□□□ 0.46
TUBE1-204ENST00000603621 IQSEC3Q9UPP2 1182 aaPredicted RBP17.95■□□□□ 0.46
TUBE1-204ENST00000603621 ZNF609O15014 1411 aa17.95■□□□□ 0.46
TUBE1-204ENST00000603621 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
TUBE1-204ENST00000603621 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
TUBE1-204ENST00000603621 PUM3Q15397 648 aaKnown RBP17.94■□□□□ 0.46
TUBE1-204ENST00000603621 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
TUBE1-204ENST00000603621 KRT26Q7Z3Y9 468 aa17.94■□□□□ 0.46
TUBE1-204ENST00000603621 PANK1Q8TE04 598 aa17.94■□□□□ 0.46
TUBE1-204ENST00000603621 C1orf115Q9H7X2 142 aa17.94■□□□□ 0.46
TUBE1-204ENST00000603621 GGA3Q9NZ52 723 aa17.94■□□□□ 0.46
TUBE1-204ENST00000603621 FRAT2O75474 233 aaPredicted RBP17.93■□□□□ 0.46
TUBE1-204ENST00000603621 CIAO1O76071 339 aa17.93■□□□□ 0.46
TUBE1-204ENST00000603621 CELF2O95319 508 aaKnown RBP17.93■□□□□ 0.46
TUBE1-204ENST00000603621 ANGEL2Q5VTE6 544 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms