RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TAOK3Q9H2K8 898 aa20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 GOLGB1Q14789 3259 aaKnown RBP20.8■□□□□ 0.92
SCAMP4-211ENST00000588907 CCDC158Q5M9N0 1113 aa20.79■□□□□ 0.92
SCAMP4-211ENST00000588907 POLLQ9UGP5 575 aa20.79■□□□□ 0.92
SCAMP4-211ENST00000588907 TTC41PQ6P2S7 1318 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 ZBTB22O15209 634 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 TIMM10P62072 90 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 ZNF804AQ7Z570 1209 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 VPS37DQ86XT2 251 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 GNL3LQ9NVN8 582 aaKnown RBP20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 AOX1Q06278 1338 aa20.78■□□□□ 0.92
SCAMP4-211ENST00000588907 MX1P20591 662 aa20.77■□□□□ 0.92
SCAMP4-211ENST00000588907 WASHC4Q2M389 1173 aa20.77■□□□□ 0.92
SCAMP4-211ENST00000588907 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
SCAMP4-211ENST00000588907 DBNLQ9UJU6 430 aaKnown RBP20.77■□□□□ 0.92
SCAMP4-211ENST00000588907 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.77■□□□□ 0.92
SCAMP4-211ENST00000588907 ERC2O15083 957 aa20.76■□□□□ 0.91
SCAMP4-211ENST00000588907 GRIN3BO60391 1043 aa20.76■□□□□ 0.91
SCAMP4-211ENST00000588907 ZNF512BQ96KM6 892 aaPredicted RBP20.76■□□□□ 0.91
SCAMP4-211ENST00000588907 CCDC8Q9H0W5 538 aaPredicted RBP20.76■□□□□ 0.91
SCAMP4-211ENST00000588907 ECHDC1Q9NTX5 307 aa20.76■□□□□ 0.91
SCAMP4-211ENST00000588907 SEMA3EO15041 775 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 UQCRFS1P1P0C7P4 283 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 HIBADHP31937 336 aaKnown RBP20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 KIAA2012Q0VF49 1180 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 DBNDD2Q9BQY9 259 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 COA1Q9GZY4 146 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 STAP2Q9UGK3 403 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 WWC3Q9ULE0 1092 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 SALL3Q9BXA9 1300 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 IRS2Q9Y4H2 1338 aa20.75■□□□□ 0.91
SCAMP4-211ENST00000588907 TTC39AQ5SRH9 613 aa20.74■□□□□ 0.91
SCAMP4-211ENST00000588907 FBXO33Q7Z6M2 555 aa20.74■□□□□ 0.91
SCAMP4-211ENST00000588907 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.74■□□□□ 0.91
SCAMP4-211ENST00000588907 OSBPL3Q9H4L5 887 aa20.74■□□□□ 0.91
SCAMP4-211ENST00000588907 G3V3G9 751 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 SNAP23O00161 211 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 GLRX3O76003 335 aaKnown RBP20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 ADORA1P30542 326 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 GPR162Q16538 588 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 CCDC102BQ68D86 513 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 SLC51AQ86UW1 340 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 FAM84BQ96KN1 310 aaPredicted RBP20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 BCL11AQ9H165 835 aa20.73■□□□□ 0.91
SCAMP4-211ENST00000588907 DCAF8L1A6NGE4 600 aa20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 NFKBIEO00221 500 aa20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 PPIP5K2O43314 1243 aa20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 ARID4AP29374 1257 aaPredicted RBP20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 PDE1AP54750 535 aa20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 TLR7Q9NYK1 1049 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 PDS5AQ29RF7 1337 aaKnown RBP20.72■□□□□ 0.91
SCAMP4-211ENST00000588907 YBX3P16989 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
SCAMP4-211ENST00000588907 ATP5JP18859 108 aa20.71■□□□□ 0.91
SCAMP4-211ENST00000588907 ARHGAP27Q6ZUM4 889 aa20.71■□□□□ 0.91
SCAMP4-211ENST00000588907 PODNQ7Z5L7 613 aa20.71■□□□□ 0.91
SCAMP4-211ENST00000588907 PLEKHM2Q8IWE5 1019 aa20.71■□□□□ 0.91
SCAMP4-211ENST00000588907 IL1R1P14778 569 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 KLRK1P26718 216 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 PDE4AP27815 886 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 GYG1P46976 350 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 BCAMP50895 628 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 C16orf71Q8IYS4 520 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 LARGE2Q8N3Y3 721 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 DENND2AQ9ULE3 1009 aa20.7■□□□□ 0.9
SCAMP4-211ENST00000588907 FRAT2O75474 233 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 PHKA1P46020 1223 aa20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 AOC3Q16853 763 aa20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 JDP2Q8WYK2 163 aa20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 CD209Q9NNX6 404 aa20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 ZNF277Q9NRM2 450 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-211ENST00000588907 MYH13Q9UKX3 1938 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 WTIPA6NIX2 430 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 RIMBP2O15034 1052 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 IGSF3O75054 1194 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 LMNB1P20700 586 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 TXNRD3Q86VQ6 643 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 NIM1KQ8IY84 436 aa20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 TDRD7Q8NHU6 1098 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 OTUD7AQ8TE49 926 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
SCAMP4-211ENST00000588907 PI4K2BQ8TCG2 481 aa20.67■□□□□ 0.9
SCAMP4-211ENST00000588907 ZGPATQ8N5A5 531 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-211ENST00000588907 SPATA5Q8NB90 893 aa20.66■□□□□ 0.9
SCAMP4-211ENST00000588907 HAUS7Q99871 368 aa20.66■□□□□ 0.9
SCAMP4-211ENST00000588907 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 ECE2O60344 883 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 RGS3P49796 1198 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 RASSF7Q02833 373 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 RASGRF1Q13972 1273 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 TTF1Q15361 905 aaPredicted RBP20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 WDR66Q8TBY9 1149 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 TBC1D22AQ8WUA7 517 aa20.65■□□□□ 0.9
SCAMP4-211ENST00000588907 ZNRF3Q9ULT6 936 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms