RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 G3V3G9 751 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 GNAI3P08754 354 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 DCAF8Q5TAQ9 597 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 PODNQ7Z5L7 613 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 PNMA8AQ86V59 439 aaPredicted RBP25.19■■□□□ 1.62
SS18-218ENST00000581021 MICALL2Q8IY33 904 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 DZIP1LQ8IYY4 767 aaKnown RBP25.19■■□□□ 1.62
SS18-218ENST00000581021 MXD3Q9BW11 206 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 COA1Q9GZY4 146 aa25.19■■□□□ 1.62
SS18-218ENST00000581021 EGFRP00533 1210 aa25.18■■□□□ 1.62
SS18-218ENST00000581021 HIRAP54198 1017 aaPredicted RBP25.18■■□□□ 1.62
SS18-218ENST00000581021 ADARB2Q9NS39 739 aaKnown RBP25.18■■□□□ 1.62
SS18-218ENST00000581021 CNOT7Q9UIV1 285 aaKnown RBP25.18■■□□□ 1.62
SS18-218ENST00000581021 MROH5Q6ZUA9 1318 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 HTRA3P83110 453 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 RSBN1LQ6PCB5 846 aaPredicted RBP25.17■■□□□ 1.62
SS18-218ENST00000581021 ATG9AQ7Z3C6 839 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 PANK1Q8TE04 598 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 DPF2Q92785 391 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 GMLQ99445 158 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 RCAN3Q9UKA8 241 aa25.17■■□□□ 1.62
SS18-218ENST00000581021 PA2G4Q9UQ80 394 aaKnown RBP25.17■■□□□ 1.62
SS18-218ENST00000581021 USP17L3A6NCW0 530 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 USP17L4A6NCW7 530 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 EYA2O00167 538 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 RPS12P25398 132 aaKnown RBP25.16■■□□□ 1.62
SS18-218ENST00000581021 DACT2Q5SW24 774 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 MAP1SQ66K74 1059 aaPredicted RBP25.16■■□□□ 1.62
SS18-218ENST00000581021 USP50Q70EL3 339 aaPredicted RBP25.16■■□□□ 1.62
SS18-218ENST00000581021 USP17L1Q7RTZ2 530 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 FTSJ3Q8IY81 847 aaKnown RBP25.16■■□□□ 1.62
SS18-218ENST00000581021 CD209Q9NNX6 404 aa25.16■■□□□ 1.62
SS18-218ENST00000581021 ITGBL1O95965 494 aaPredicted RBP25.15■■□□□ 1.62
SS18-218ENST00000581021 MTX1Q13505 466 aa25.15■■□□□ 1.62
SS18-218ENST00000581021 METTL24Q5JXM2 366 aa25.15■■□□□ 1.62
SS18-218ENST00000581021 SIL1Q9H173 461 aa25.15■■□□□ 1.62
SS18-218ENST00000581021 CLEC11AQ9Y240 323 aa25.15■■□□□ 1.62
SS18-218ENST00000581021 PASKQ96RG2 1323 aa25.14■■□□□ 1.62
SS18-218ENST00000581021 UBE4AQ14139 1066 aa25.14■■□□□ 1.62
SS18-218ENST00000581021 SAMD7Q7Z3H4 446 aa25.14■■□□□ 1.62
SS18-218ENST00000581021 ITPRIPQ8IWB1 547 aa25.14■■□□□ 1.62
SS18-218ENST00000581021 YTHDC1Q96MU7 727 aaKnown RBP25.14■■□□□ 1.62
SS18-218ENST00000581021 GNAI2P04899 355 aa25.13■■□□□ 1.61
SS18-218ENST00000581021 GYG1P46976 350 aa25.13■■□□□ 1.61
SS18-218ENST00000581021 ZBTB7BO15156 539 aaPredicted RBP25.12■■□□□ 1.61
SS18-218ENST00000581021 PDE8BO95263 885 aa25.12■■□□□ 1.61
SS18-218ENST00000581021 C1orf115Q9H7X2 142 aa25.12■■□□□ 1.61
SS18-218ENST00000581021 COPRSQ9NQ92 184 aa25.12■■□□□ 1.61
SS18-218ENST00000581021 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
SS18-218ENST00000581021 PNMA6EA0A0J9YXQ4 647 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 H7C1D1 291 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 SRGAP3O43295 1099 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 IL1R1P14778 569 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 FGFR2P21802 821 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 APLP1P51693 650 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 ZNF280AP59817 542 aaPredicted RBP25.11■■□□□ 1.61
SS18-218ENST00000581021 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
SS18-218ENST00000581021 STRIP1Q5VSL9 837 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 CNTROBQ8N137 903 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 AGBL3Q8NEM8 1001 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 FBXW7Q969H0 707 aa25.11■■□□□ 1.61
SS18-218ENST00000581021 FAM84BQ96KN1 310 aaPredicted RBP25.11■■□□□ 1.61
SS18-218ENST00000581021 CIAO1O76071 339 aa25.1■■□□□ 1.61
SS18-218ENST00000581021 GTF2IP78347 998 aa25.1■■□□□ 1.61
SS18-218ENST00000581021 FMR1Q06787 632 aaKnown RBP eCLIP25.1■■□□□ 1.61
SS18-218ENST00000581021 ZNF804AQ7Z570 1209 aa25.1■■□□□ 1.61
SS18-218ENST00000581021 CERS5Q8N5B7 392 aa25.09■■□□□ 1.61
SS18-218ENST00000581021 PGAP2Q9UHJ9 254 aa25.09■■□□□ 1.61
SS18-218ENST00000581021 JAG2Q9Y219 1238 aa25.09■■□□□ 1.61
SS18-218ENST00000581021 ASTN2O75129 1339 aaPredicted RBP25.09■■□□□ 1.61
SS18-218ENST00000581021 TTLL5Q6EMB2 1281 aa25.08■■□□□ 1.61
SS18-218ENST00000581021 TRAF5O00463 557 aa25.07■■□□□ 1.6
SS18-218ENST00000581021 USP17L8P0C7I0 530 aa25.07■■□□□ 1.6
SS18-218ENST00000581021 PUM3Q15397 648 aaKnown RBP25.07■■□□□ 1.6
SS18-218ENST00000581021 RBM26Q5T8P6 1007 aaKnown RBP25.07■■□□□ 1.6
SS18-218ENST00000581021 C20orf194Q5TEA3 1177 aa25.07■■□□□ 1.6
SS18-218ENST00000581021 FBXO33Q7Z6M2 555 aa25.07■■□□□ 1.6
SS18-218ENST00000581021 FBXO3Q9UK99 471 aa25.07■■□□□ 1.6
SS18-218ENST00000581021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.07■■□□□ 1.6
SS18-218ENST00000581021 HIBADHP31937 336 aaKnown RBP25.06■■□□□ 1.6
SS18-218ENST00000581021 KIF4BQ2VIQ3 1234 aa25.06■■□□□ 1.6
SS18-218ENST00000581021 TDRD7Q8NHU6 1098 aaKnown RBP25.06■■□□□ 1.6
SS18-218ENST00000581021 DNAJC5GQ8N7S2 189 aa25.05■■□□□ 1.6
SS18-218ENST00000581021 IL15P40933 162 aaPredicted RBP25.04■■□□□ 1.6
SS18-218ENST00000581021 BCAMP50895 628 aa25.04■■□□□ 1.6
SS18-218ENST00000581021 POLA2Q14181 598 aa25.04■■□□□ 1.6
SS18-218ENST00000581021 DLK2Q6UY11 383 aa25.04■■□□□ 1.6
SS18-218ENST00000581021 ZC3H15Q8WU90 426 aaKnown RBP25.04■■□□□ 1.6
SS18-218ENST00000581021 GLIS2Q9BZE0 524 aaPredicted RBP25.04■■□□□ 1.6
SS18-218ENST00000581021 IQSEC3Q9UPP2 1182 aaPredicted RBP25.04■■□□□ 1.6
SS18-218ENST00000581021 MYO3BQ8WXR4 1341 aa25.04■■□□□ 1.6
SS18-218ENST00000581021 KIAA0825Q8IV33 1275 aa25.03■■□□□ 1.6
SS18-218ENST00000581021 MYOZ2Q9NPC6 264 aa25.03■■□□□ 1.6
SS18-218ENST00000581021 COG6Q9Y2V7 657 aa25.03■■□□□ 1.6
SS18-218ENST00000581021 FAM205AQ6ZU69 1335 aa25.03■■□□□ 1.6
SS18-218ENST00000581021 COL1A1P02452 1464 aaPredicted RBP25.02■■□□□ 1.6
SS18-218ENST00000581021 SASH1O94885 1247 aa25.02■■□□□ 1.6
SS18-218ENST00000581021 MVPQ14764 893 aaKnown RBP25.02■■□□□ 1.6
SS18-218ENST00000581021 LPIN2Q92539 896 aa25.02■■□□□ 1.6
SS18-218ENST00000581021 CEP126Q9P2H0 1117 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms