RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 USP17L4A6NCW7 530 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 NEURL1BA8MQ27 555 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 USP17L8P0C7I0 530 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 USP17L1Q7RTZ2 530 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 MYOZ2Q9NPC6 264 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 MED23Q9ULK4 1368 aa18.91■□□□□ 0.62
NPLOC4-207ENST00000572346 KIF23Q02241 960 aaPredicted RBP18.9■□□□□ 0.62
NPLOC4-207ENST00000572346 FAM161AQ3B820 660 aa18.9■□□□□ 0.62
NPLOC4-207ENST00000572346 UBE3BQ7Z3V4 1068 aa18.9■□□□□ 0.62
NPLOC4-207ENST00000572346 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
NPLOC4-207ENST00000572346 ZNF646O15015 1829 aaPredicted RBP18.89■□□□□ 0.61
NPLOC4-207ENST00000572346 H7C1W4 665 aa18.89■□□□□ 0.61
NPLOC4-207ENST00000572346 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
NPLOC4-207ENST00000572346 SLC10A3P09131 477 aa18.89■□□□□ 0.61
NPLOC4-207ENST00000572346 CCT4P50991 539 aaKnown RBP18.89■□□□□ 0.61
NPLOC4-207ENST00000572346 AKAP11Q9UKA4 1901 aa18.88■□□□□ 0.61
NPLOC4-207ENST00000572346 DGKZQ13574 1117 aa18.88■□□□□ 0.61
NPLOC4-207ENST00000572346 SAGE1Q9NXZ1 904 aa18.88■□□□□ 0.61
NPLOC4-207ENST00000572346 PITPNM2Q9BZ72 1349 aa18.88■□□□□ 0.61
NPLOC4-207ENST00000572346 IL16Q14005 1332 aa18.87■□□□□ 0.61
NPLOC4-207ENST00000572346 DACT2Q5SW24 774 aa18.87■□□□□ 0.61
NPLOC4-207ENST00000572346 PLA2G12BQ9BX93 195 aa18.87■□□□□ 0.61
NPLOC4-207ENST00000572346 PAPPA2Q9BXP8 1791 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 RGS19P49795 217 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 FLIIQ13045 1269 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 GCKRQ14397 625 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 TXNRD3Q86VQ6 643 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 CSRNP1Q96S65 589 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 MXD3Q9BW11 206 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 CACNA1FO60840 1977 aa18.86■□□□□ 0.61
NPLOC4-207ENST00000572346 TRPA1O75762 1119 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 ITGA6P23229 1130 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 CASP7P55210 303 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 FKBP1BP68106 108 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 NBPF9Q3BBW0 867 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 RASAL3Q86YV0 1011 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 COA1Q9GZY4 146 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 LEMD3Q9Y2U8 911 aa18.85■□□□□ 0.61
NPLOC4-207ENST00000572346 MYO3BQ8WXR4 1341 aa18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 MLLT1Q03111 559 aaPredicted RBP18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 FKBP5Q13451 457 aaPredicted RBP18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 STRIP1Q5VSL9 837 aa18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 OGFOD1Q8N543 542 aa18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 DNAAF4Q8WXU2 420 aa18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 FBXW7Q969H0 707 aa18.84■□□□□ 0.61
NPLOC4-207ENST00000572346 ZNF804BA4D1E1 1349 aa18.83■□□□□ 0.61
NPLOC4-207ENST00000572346 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
NPLOC4-207ENST00000572346 WNT10BO00744 389 aa18.83■□□□□ 0.6
NPLOC4-207ENST00000572346 CSF1RP07333 972 aa18.83■□□□□ 0.6
NPLOC4-207ENST00000572346 PRAMEF18Q5VWM3 479 aa18.83■□□□□ 0.6
NPLOC4-207ENST00000572346 MOB2Q70IA6 237 aa18.83■□□□□ 0.6
NPLOC4-207ENST00000572346 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
NPLOC4-207ENST00000572346 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
NPLOC4-207ENST00000572346 KLRK1P26718 216 aa18.82■□□□□ 0.6
NPLOC4-207ENST00000572346 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
NPLOC4-207ENST00000572346 MPHOSPH8Q99549 860 aa18.82■□□□□ 0.6
NPLOC4-207ENST00000572346 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
NPLOC4-207ENST00000572346 TTLL5Q6EMB2 1281 aa18.81■□□□□ 0.6
NPLOC4-207ENST00000572346 REM2Q8IYK8 340 aaPredicted RBP18.81■□□□□ 0.6
NPLOC4-207ENST00000572346 E9PSI1 815 aa18.8■□□□□ 0.6
NPLOC4-207ENST00000572346 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
NPLOC4-207ENST00000572346 VAMP4O75379 141 aa18.8■□□□□ 0.6
NPLOC4-207ENST00000572346 CHRNDQ07001 517 aa18.8■□□□□ 0.6
NPLOC4-207ENST00000572346 SASH1O94885 1247 aa18.79■□□□□ 0.6
NPLOC4-207ENST00000572346 MMP14P50281 582 aa18.79■□□□□ 0.6
NPLOC4-207ENST00000572346 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
NPLOC4-207ENST00000572346 ZBED9Q6R2W3 1325 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 ANKRD18BA2A2Z9 1011 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 KCNJ4P48050 445 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 GTF2IP78347 998 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 EXOSC9Q06265 439 aaKnown RBP18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 KIAA0825Q8IV33 1275 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 HDAC9Q9UKV0 1011 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 A0A1B0GUL6 1792 aa18.78■□□□□ 0.6
NPLOC4-207ENST00000572346 NF2P35240 595 aa18.77■□□□□ 0.6
NPLOC4-207ENST00000572346 TTLL12Q14166 644 aaPredicted RBP18.77■□□□□ 0.6
NPLOC4-207ENST00000572346 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
NPLOC4-207ENST00000572346 ZBED3Q96IU2 234 aaPredicted RBP18.77■□□□□ 0.6
NPLOC4-207ENST00000572346 CD209Q9NNX6 404 aa18.77■□□□□ 0.6
NPLOC4-207ENST00000572346 IRS2Q9Y4H2 1338 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 F6X3S4 739 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 SNAP23O00161 211 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 TAF5LO75529 589 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 FOXO4P98177 505 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 SLFN5Q08AF3 891 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 BEND3Q5T5X7 828 aa18.76■□□□□ 0.59
NPLOC4-207ENST00000572346 IFIT5Q13325 482 aaKnown RBP18.75■□□□□ 0.59
NPLOC4-207ENST00000572346 C15orf52Q6ZUT6 534 aaKnown RBP18.75■□□□□ 0.59
NPLOC4-207ENST00000572346 APOBEC3FQ8IUX4 373 aaKnown RBP18.75■□□□□ 0.59
NPLOC4-207ENST00000572346 HELBQ8NG08 1087 aaPredicted RBP18.75■□□□□ 0.59
NPLOC4-207ENST00000572346 CTU1Q7Z7A3 348 aaKnown RBP18.74■□□□□ 0.59
NPLOC4-207ENST00000572346 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
NPLOC4-207ENST00000572346 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
NPLOC4-207ENST00000572346 TBC1D8O95759 1140 aa18.72■□□□□ 0.59
NPLOC4-207ENST00000572346 TM4SF4P48230 202 aa18.72■□□□□ 0.59
NPLOC4-207ENST00000572346 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms