RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, human

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
E4F1-208	ENST00000567111	DOK7	Q18PE1	504 aa		27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	CAVIN4	Q5BKX8	364 aa		27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	ZNF804A	Q7Z570	1209 aa		27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	COA1	Q9GZY4	146 aa		27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	RWDD1	Q9H446	243 aa	Predicted RBP	27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	GOLGB1	Q14789	3259 aa	Known RBP	27.93	■■■□□ 2.06
E4F1-208	ENST00000567111	DICER1	Q9UPY3	1922 aa	Known RBP	27.92	■■■□□ 2.06
E4F1-208	ENST00000567111	SASH1	O94885	1247 aa		27.92	■■■□□ 2.06
E4F1-208	ENST00000567111	FGFR2	P21802	821 aa		27.92	■■■□□ 2.06
E4F1-208	ENST00000567111	PODN	Q7Z5L7	613 aa		27.92	■■■□□ 2.06
E4F1-208	ENST00000567111	GPR108	Q9NPR9	543 aa		27.92	■■■□□ 2.06
E4F1-208	ENST00000567111	FZD9	O00144	591 aa		27.91	■■■□□ 2.06
E4F1-208	ENST00000567111	VPS37D	Q86XT2	251 aa		27.91	■■■□□ 2.06
E4F1-208	ENST00000567111	DCTPP1	Q9H773	170 aa		27.91	■■■□□ 2.06
E4F1-208	ENST00000567111	DBNDD1	Q9H9R9	158 aa		27.91	■■■□□ 2.06
E4F1-208	ENST00000567111	ECE2	O60344	883 aa		27.9	■■■□□ 2.06
E4F1-208	ENST00000567111	HIBADH	P31937	336 aa	Known RBP	27.9	■■■□□ 2.06
E4F1-208	ENST00000567111	TXNRD3	Q86VQ6	643 aa		27.9	■■■□□ 2.06
E4F1-208	ENST00000567111	KIF1BP	Q96EK5	621 aa		27.9	■■■□□ 2.06
E4F1-208	ENST00000567111	HDAC1	Q13547	482 aa	Predicted RBP	27.89	■■■□□ 2.06
E4F1-208	ENST00000567111	TNIP1	Q15025	636 aa		27.89	■■■□□ 2.06
E4F1-208	ENST00000567111	NEUROD6	Q96NK8	337 aa		27.89	■■■□□ 2.06
E4F1-208	ENST00000567111	TIMM10	P62072	90 aa		27.88	■■■□□ 2.05
E4F1-208	ENST00000567111	RHPN1	Q8TCX5	695 aa		27.88	■■■□□ 2.05
E4F1-208	ENST00000567111	FAM84B	Q96KN1	310 aa	Predicted RBP	27.88	■■■□□ 2.05
E4F1-208	ENST00000567111		A0A1B0GUL6	1792 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111		A0A1B0GUL7	405 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	APBB1	O00213	710 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	YY1	P25490	414 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	KLRK1	P26718	216 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	GORAB	Q5T7V8	394 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	CD209	Q9NNX6	404 aa		27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	GNL3L	Q9NVN8	582 aa	Known RBP	27.87	■■■□□ 2.05
E4F1-208	ENST00000567111	GYG1	P46976	350 aa		27.86	■■■□□ 2.05
E4F1-208	ENST00000567111	CIAPIN1	Q6FI81	312 aa		27.86	■■■□□ 2.05
E4F1-208	ENST00000567111	FBXO33	Q7Z6M2	555 aa		27.86	■■■□□ 2.05
E4F1-208	ENST00000567111	IRS2	Q9Y4H2	1338 aa		27.86	■■■□□ 2.05
E4F1-208	ENST00000567111	TNNI3K	Q59H18	835 aa		27.85	■■■□□ 2.05
E4F1-208	ENST00000567111	CLASRP	Q8N2M8	674 aa	Known RBP	27.85	■■■□□ 2.05
E4F1-208	ENST00000567111	ZBTB47	Q9UFB7	747 aa	Predicted RBP	27.85	■■■□□ 2.05
E4F1-208	ENST00000567111	FPGT-TNNI3K	V9GXZ4	949 aa		27.85	■■■□□ 2.05
E4F1-208	ENST00000567111	GLTPD2	A6NH11	291 aa		27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	FRAT2	O75474	233 aa	Predicted RBP	27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	CXCL9	Q07325	125 aa		27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	GCC1	Q96CN9	775 aa		27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	LRRCC1	Q9C099	1032 aa		27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	KDM2B	Q8NHM5	1336 aa		27.84	■■■□□ 2.05
E4F1-208	ENST00000567111	YDJC	A8MPS7	323 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	RAD17	O75943	681 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	IL1R1	P14778	569 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	BCAM	P50895	628 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	GPC2	Q8N158	579 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	XAGE2	Q96GT9	111 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	GJA3	Q9Y6H8	435 aa		27.83	■■■□□ 2.05
E4F1-208	ENST00000567111	USP17L3	A6NCW0	530 aa		27.82	■■■□□ 2.04
E4F1-208	ENST00000567111	USP17L4	A6NCW7	530 aa		27.82	■■■□□ 2.04
E4F1-208	ENST00000567111	USP17L1	Q7RTZ2	530 aa		27.82	■■■□□ 2.04
E4F1-208	ENST00000567111	TDRD7	Q8NHU6	1098 aa	Known RBP	27.81	■■■□□ 2.04
E4F1-208	ENST00000567111	IL1RAPL2	Q9NP60	686 aa		27.81	■■■□□ 2.04
E4F1-208	ENST00000567111	COL4A5	P29400	1685 aa		27.81	■■■□□ 2.04
E4F1-208	ENST00000567111	CCDC158	Q5M9N0	1113 aa		27.8	■■■□□ 2.04
E4F1-208	ENST00000567111	TTLL5	Q6EMB2	1281 aa		27.8	■■■□□ 2.04
E4F1-208	ENST00000567111	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.8	■■■□□ 2.04
E4F1-208	ENST00000567111	TIAM2	Q8IVF5	1701 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	ZNF541	Q9H0D2	1346 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	DDN	O94850	711 aa	Predicted RBP	27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	IFIT2	P09913	472 aa	Known RBP	27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	ADORA1	P30542	326 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	STRIP1	Q5VSL9	837 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	AACS	Q86V21	672 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	FBXW7	Q969H0	707 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	EAF2	Q96CJ1	260 aa	Predicted RBP	27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	KCNQ5	Q9NR82	932 aa		27.79	■■■□□ 2.04
E4F1-208	ENST00000567111	VIL1	P09327	827 aa	Known RBP	27.78	■■■□□ 2.04
E4F1-208	ENST00000567111	GTF2I	P78347	998 aa		27.78	■■■□□ 2.04
E4F1-208	ENST00000567111	CCDC102B	Q68D86	513 aa		27.78	■■■□□ 2.04
E4F1-208	ENST00000567111	BCL11A	Q9H165	835 aa		27.78	■■■□□ 2.04
E4F1-208	ENST00000567111	ZNF609	O15014	1411 aa		27.77	■■■□□ 2.04
E4F1-208	ENST00000567111	PSMD14	O00487	310 aa		27.77	■■■□□ 2.04
E4F1-208	ENST00000567111	SEMA3E	O15041	775 aa		27.77	■■■□□ 2.04
E4F1-208	ENST00000567111	CCDC8	Q9H0W5	538 aa	Predicted RBP	27.77	■■■□□ 2.04
E4F1-208	ENST00000567111	IGHD	P01880	384 aa		27.76	■■■□□ 2.03
E4F1-208	ENST00000567111	UQCRFS1P1	P0C7P4	283 aa		27.76	■■■□□ 2.03
E4F1-208	ENST00000567111	RPS12	P25398	132 aa	Known RBP	27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	PHKA1	P46020	1223 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	ANKRD45	Q5TZF3	282 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	ERICH6B	Q5W0A0	696 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	DBNDD2	Q9BQY9	259 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	DENND2A	Q9ULE3	1009 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	UTRN	P46939	3433 aa		27.75	■■■□□ 2.03
E4F1-208	ENST00000567111	FAM205A	Q6ZU69	1335 aa		27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	MYO3B	Q8WXR4	1341 aa		27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	ZBTB22	O15209	634 aa		27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	LMOD1	P29536	600 aa	Predicted RBP	27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	TTC39A	Q5SRH9	613 aa		27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	AGBL3	Q8NEM8	1001 aa		27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	ZNF526	Q8TF50	670 aa	Predicted RBP	27.74	■■■□□ 2.03
E4F1-208	ENST00000567111	SMARCA5	O60264	1052 aa	Predicted RBP	27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms