RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 GRM8O00222 908 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 CA12O43570 354 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 EGFRP00533 1210 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 KIF4BQ2VIQ3 1234 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 DACT2Q5SW24 774 aa19.27■□□□□ 0.68
CMTM3-212ENST00000566121 UTYO14607 1347 aa19.26■□□□□ 0.67
CMTM3-212ENST00000566121 IFIT5Q13325 482 aaKnown RBP19.26■□□□□ 0.67
CMTM3-212ENST00000566121 FAM161AQ3B820 660 aa19.26■□□□□ 0.67
CMTM3-212ENST00000566121 FKBP1BP68106 108 aa19.25■□□□□ 0.67
CMTM3-212ENST00000566121 CYP4F22Q6NT55 531 aa19.25■□□□□ 0.67
CMTM3-212ENST00000566121 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
CMTM3-212ENST00000566121 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
CMTM3-212ENST00000566121 F6X3S4 739 aa19.24■□□□□ 0.67
CMTM3-212ENST00000566121 BRPF1P55201 1214 aaPredicted RBP19.24■□□□□ 0.67
CMTM3-212ENST00000566121 CHRNDQ07001 517 aa19.24■□□□□ 0.67
CMTM3-212ENST00000566121 SULF1Q8IWU6 871 aa19.24■□□□□ 0.67
CMTM3-212ENST00000566121 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
CMTM3-212ENST00000566121 PTPRCP08575 1304 aa19.24■□□□□ 0.67
CMTM3-212ENST00000566121 POLR2AP24928 1970 aaKnown RBP19.23■□□□□ 0.67
CMTM3-212ENST00000566121 WTIPA6NIX2 430 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-212ENST00000566121 FKBP1AP62942 108 aaKnown RBP19.23■□□□□ 0.67
CMTM3-212ENST00000566121 SLFN5Q08AF3 891 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 NOGQ13253 232 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 SCARF1Q14162 830 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 TXNRD3Q86VQ6 643 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 TRMT2AQ8IZ69 625 aaKnown RBP19.23■□□□□ 0.67
CMTM3-212ENST00000566121 OGFOD1Q8N543 542 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 C2orf69Q8N8R5 385 aa19.23■□□□□ 0.67
CMTM3-212ENST00000566121 GBA2Q9HCG7 927 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-212ENST00000566121 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-212ENST00000566121 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
CMTM3-212ENST00000566121 LMBR1LQ6UX01 489 aa19.22■□□□□ 0.67
CMTM3-212ENST00000566121 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
CMTM3-212ENST00000566121 CCDC102AQ96A19 550 aa19.22■□□□□ 0.67
CMTM3-212ENST00000566121 BEGAINQ9BUH8 593 aa19.22■□□□□ 0.67
CMTM3-212ENST00000566121 C9orf78Q9NZ63 289 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-212ENST00000566121 CCER2I3L3R5 266 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 IL1R1P14778 569 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 HUNKP57058 714 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 CCDC57Q2TAC2 916 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 ALDH1L2Q3SY69 923 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 RBM26Q5T8P6 1007 aaKnown RBP19.21■□□□□ 0.67
CMTM3-212ENST00000566121 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 GGA3Q9NZ52 723 aa19.21■□□□□ 0.67
CMTM3-212ENST00000566121 RABL6Q3YEC7 729 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-212ENST00000566121 RGMBQ6NW40 437 aa19.2■□□□□ 0.66
CMTM3-212ENST00000566121 REM2Q8IYK8 340 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-212ENST00000566121 MTMR14Q8NCE2 650 aa19.2■□□□□ 0.66
CMTM3-212ENST00000566121 ZBED3Q96IU2 234 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-212ENST00000566121 CD209Q9NNX6 404 aa19.2■□□□□ 0.66
CMTM3-212ENST00000566121 LBX1P52954 281 aa19.19■□□□□ 0.66
CMTM3-212ENST00000566121 EPHA10Q5JZY3 1008 aa19.19■□□□□ 0.66
CMTM3-212ENST00000566121 UBE4AQ14139 1066 aa19.18■□□□□ 0.66
CMTM3-212ENST00000566121 ANGEL2Q5VTE6 544 aaKnown RBP19.18■□□□□ 0.66
CMTM3-212ENST00000566121 LDHAL6AQ6ZMR3 332 aa19.18■□□□□ 0.66
CMTM3-212ENST00000566121 CDCA5Q96FF9 252 aa19.18■□□□□ 0.66
CMTM3-212ENST00000566121 KAZALD1Q96I82 304 aa19.18■□□□□ 0.66
CMTM3-212ENST00000566121 ZNF646O15015 1829 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-212ENST00000566121 FAM155AB1AL88 458 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-212ENST00000566121 ADM5C9JUS6 153 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 WNT10BO00744 389 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 AOC2O75106 756 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 KCNJ4P48050 445 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 PAXIP1Q6ZW49 1069 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-212ENST00000566121 ZNF408Q9H9D4 720 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 HDAC9Q9UKV0 1011 aa19.17■□□□□ 0.66
CMTM3-212ENST00000566121 SASH1O94885 1247 aa19.16■□□□□ 0.66
CMTM3-212ENST00000566121 ZNF804AQ7Z570 1209 aa19.16■□□□□ 0.66
CMTM3-212ENST00000566121 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
CMTM3-212ENST00000566121 SAGE1Q9NXZ1 904 aa19.16■□□□□ 0.66
CMTM3-212ENST00000566121 KLRK1P26718 216 aa19.15■□□□□ 0.66
CMTM3-212ENST00000566121 NBPF9Q3BBW0 867 aa19.15■□□□□ 0.66
CMTM3-212ENST00000566121 SLC4A10Q6U841 1118 aa19.15■□□□□ 0.66
CMTM3-212ENST00000566121 RIPOR2Q9Y4F9 1068 aa19.15■□□□□ 0.66
CMTM3-212ENST00000566121 ASTN2O75129 1339 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-212ENST00000566121 FAM205AQ6ZU69 1335 aa19.15■□□□□ 0.66
CMTM3-212ENST00000566121 TAF5LO75529 589 aa19.14■□□□□ 0.65
CMTM3-212ENST00000566121 NBPF7P0C2Y1 421 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-212ENST00000566121 GTF2IP78347 998 aa19.14■□□□□ 0.65
CMTM3-212ENST00000566121 DLK2Q6UY11 383 aa19.14■□□□□ 0.65
CMTM3-212ENST00000566121 SUCLG2Q96I99 432 aa19.14■□□□□ 0.65
CMTM3-212ENST00000566121 UNCXA6NJT0 531 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 SLC10A3P09131 477 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 APOBEC3FQ8IUX4 373 aaKnown RBP19.13■□□□□ 0.65
CMTM3-212ENST00000566121 CNNM1Q9NRU3 951 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 MROH5Q6ZUA9 1318 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 SPEF2Q9C093 1822 aa19.13■□□□□ 0.65
CMTM3-212ENST00000566121 COL1A1P02452 1464 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-212ENST00000566121 ZNF157P51786 506 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-212ENST00000566121 TDRD7Q8NHU6 1098 aaKnown RBP19.12■□□□□ 0.65
CMTM3-212ENST00000566121 USP44Q9H0E7 712 aa19.12■□□□□ 0.65
CMTM3-212ENST00000566121 KIF16BQ96L93 1317 aa19.11■□□□□ 0.65
CMTM3-212ENST00000566121 HELBQ8NG08 1087 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-212ENST00000566121 ZNF594Q96JF6 807 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-212ENST00000566121 MXD3Q9BW11 206 aa19.11■□□□□ 0.65
CMTM3-212ENST00000566121 PPP2R3BQ9Y5P8 575 aa19.11■□□□□ 0.65
CMTM3-212ENST00000566121 PAPPA2Q9BXP8 1791 aa19.11■□□□□ 0.65
CMTM3-212ENST00000566121 SNAP23O00161 211 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms