RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 GGA3Q9NZ52 723 aa21.32■■□□□ 1
CCNF-203ENST00000564236 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
CCNF-203ENST00000564236 ADM5C9JUS6 153 aa21.31■■□□□ 1
CCNF-203ENST00000564236 AOC2O75106 756 aa21.31■■□□□ 1
CCNF-203ENST00000564236 DACT2Q5SW24 774 aa21.31■■□□□ 1
CCNF-203ENST00000564236 RBM26Q5T8P6 1007 aaKnown RBP21.31■■□□□ 1
CCNF-203ENST00000564236 STRIP1Q5VSL9 837 aa21.31■■□□□ 1
CCNF-203ENST00000564236 BEGAINQ9BUH8 593 aa21.31■■□□□ 1
CCNF-203ENST00000564236 MYO3BQ8WXR4 1341 aa21.3■■□□□ 1
CCNF-203ENST00000564236 HUNKP57058 714 aa21.3■■□□□ 1
CCNF-203ENST00000564236 FOXO4P98177 505 aa21.3■■□□□ 1
CCNF-203ENST00000564236 NOGQ13253 232 aa21.3■■□□□ 1
CCNF-203ENST00000564236 DLK2Q6UY11 383 aa21.3■■□□□ 1
CCNF-203ENST00000564236 SULF1Q8IWU6 871 aa21.3■■□□□ 1
CCNF-203ENST00000564236 GBA2Q9HCG7 927 aaPredicted RBP21.3■■□□□ 1
CCNF-203ENST00000564236 MYOZ2Q9NPC6 264 aa21.3■■□□□ 1
CCNF-203ENST00000564236 ZNF804BA4D1E1 1349 aa21.29■■□□□ 1
CCNF-203ENST00000564236 ZNF646O15015 1829 aaPredicted RBP21.29■■□□□ 1
CCNF-203ENST00000564236 F6X3S4 739 aa21.29■■□□□ 1
CCNF-203ENST00000564236 SCARF1Q14162 830 aa21.29■■□□□ 1
CCNF-203ENST00000564236 C15orf52Q6ZUT6 534 aaKnown RBP21.29■■□□□ 1
CCNF-203ENST00000564236 TXNRD3Q86VQ6 643 aa21.29■■□□□ 1
CCNF-203ENST00000564236 MPHOSPH8Q99549 860 aa21.29■■□□□ 1
CCNF-203ENST00000564236 ASTN2O75129 1339 aaPredicted RBP21.29■■□□□ 1
CCNF-203ENST00000564236 IRS2Q9Y4H2 1338 aa21.29■■□□□ 1
CCNF-203ENST00000564236 ANKRD18BA2A2Z9 1011 aa21.28■■□□□ 1
CCNF-203ENST00000564236 FAM155AB1AL88 458 aaPredicted RBP21.28■■□□□ 1
CCNF-203ENST00000564236 GRM1Q13255 1194 aa21.28■■□□□ 1
CCNF-203ENST00000564236 FAM9BQ8IZU0 186 aa21.28■■□□□ 1
CCNF-203ENST00000564236 C2orf69Q8N8R5 385 aa21.28■■□□□ 1
CCNF-203ENST00000564236 CHRNDQ07001 517 aa21.27■■□□□ 1
CCNF-203ENST00000564236 ANGEL2Q5VTE6 544 aaKnown RBP21.27■■□□□ 1
CCNF-203ENST00000564236 RGMBQ6NW40 437 aa21.27■■□□□ 1
CCNF-203ENST00000564236 GRM8O00222 908 aa21.26■□□□□ 0.99
CCNF-203ENST00000564236 ALDH1L1O75891 902 aa21.26■□□□□ 0.99
CCNF-203ENST00000564236 FKBP1BP68106 108 aa21.26■□□□□ 0.99
CCNF-203ENST00000564236 CCDC102AQ96A19 550 aa21.26■□□□□ 0.99
CCNF-203ENST00000564236 CDCA5Q96FF9 252 aa21.26■□□□□ 0.99
CCNF-203ENST00000564236 SPEF2Q9C093 1822 aa21.25■□□□□ 0.99
CCNF-203ENST00000564236 CAPN15O75808 1086 aa21.25■□□□□ 0.99
CCNF-203ENST00000564236 KLRK1P26718 216 aa21.25■□□□□ 0.99
CCNF-203ENST00000564236 IFIT5Q13325 482 aaKnown RBP21.25■□□□□ 0.99
CCNF-203ENST00000564236 OGFOD1Q8N543 542 aa21.24■□□□□ 0.99
CCNF-203ENST00000564236 EPHA10Q5JZY3 1008 aa21.23■□□□□ 0.99
CCNF-203ENST00000564236 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
CCNF-203ENST00000564236 UTYO14607 1347 aa21.23■□□□□ 0.99
CCNF-203ENST00000564236 WNT10BO00744 389 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 SLC10A3P09131 477 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 ZBED3Q96IU2 234 aaPredicted RBP21.22■□□□□ 0.99
CCNF-203ENST00000564236 ZIC5Q96T25 663 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 MXD3Q9BW11 206 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 CD209Q9NNX6 404 aa21.22■□□□□ 0.99
CCNF-203ENST00000564236 NBPF9Q3BBW0 867 aa21.21■□□□□ 0.99
CCNF-203ENST00000564236 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
CCNF-203ENST00000564236 SAGE1Q9NXZ1 904 aa21.21■□□□□ 0.99
CCNF-203ENST00000564236 PAPPA2Q9BXP8 1791 aa21.2■□□□□ 0.99
CCNF-203ENST00000564236 POLR2AP24928 1970 aaKnown RBP21.2■□□□□ 0.98
CCNF-203ENST00000564236 IL1R1P14778 569 aa21.2■□□□□ 0.98
CCNF-203ENST00000564236 KCNJ4P48050 445 aa21.2■□□□□ 0.98
CCNF-203ENST00000564236 ZNF157P51786 506 aaPredicted RBP21.2■□□□□ 0.98
CCNF-203ENST00000564236 FKBP1AP62942 108 aaKnown RBP21.19■□□□□ 0.98
CCNF-203ENST00000564236 CCDC57Q2TAC2 916 aa21.19■□□□□ 0.98
CCNF-203ENST00000564236 KAZALD1Q96I82 304 aa21.19■□□□□ 0.98
CCNF-203ENST00000564236 C9orf78Q9NZ63 289 aaPredicted RBP21.19■□□□□ 0.98
CCNF-203ENST00000564236 A0A1B0GUL6 1792 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 E9PSI1 815 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 SNAP23O00161 211 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 TAF5LO75529 589 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 GTF2IP78347 998 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 LDHAL6AQ6ZMR3 332 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 REM2Q8IYK8 340 aaPredicted RBP21.18■□□□□ 0.98
CCNF-203ENST00000564236 MTMR14Q8NCE2 650 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 ABHD8Q96I13 439 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 HDAC9Q9UKV0 1011 aa21.18■□□□□ 0.98
CCNF-203ENST00000564236 KIF23Q02241 960 aaPredicted RBP21.17■□□□□ 0.98
CCNF-203ENST00000564236 RASAL3Q86YV0 1011 aa21.17■□□□□ 0.98
CCNF-203ENST00000564236 MRPL50Q8N5N7 158 aaKnown RBP21.17■□□□□ 0.98
CCNF-203ENST00000564236 TSKSQ9UJT2 592 aa21.17■□□□□ 0.98
CCNF-203ENST00000564236 PTPRCP08575 1304 aa21.17■□□□□ 0.98
CCNF-203ENST00000564236 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
CCNF-203ENST00000564236 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 ZNF804AQ7Z570 1209 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 KIAA0825Q8IV33 1275 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 CERS5Q8N5B7 392 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 HELBQ8NG08 1087 aaPredicted RBP21.16■□□□□ 0.98
CCNF-203ENST00000564236 FBXW7Q969H0 707 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
CCNF-203ENST00000564236 COL1A1P02452 1464 aaPredicted RBP21.15■□□□□ 0.98
CCNF-203ENST00000564236 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
CCNF-203ENST00000564236 APOBEC3FQ8IUX4 373 aaKnown RBP21.15■□□□□ 0.98
CCNF-203ENST00000564236 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
CCNF-203ENST00000564236 ZNF594Q96JF6 807 aaPredicted RBP21.15■□□□□ 0.98
CCNF-203ENST00000564236 SASH1O94885 1247 aa21.14■□□□□ 0.97
CCNF-203ENST00000564236 SLFN5Q08AF3 891 aa21.14■□□□□ 0.97
CCNF-203ENST00000564236 UBE4AQ14139 1066 aa21.14■□□□□ 0.97
CCNF-203ENST00000564236 CSRNP1Q96S65 589 aa21.14■□□□□ 0.97
CCNF-203ENST00000564236 CNNM1Q9NRU3 951 aa21.14■□□□□ 0.97
CCNF-203ENST00000564236 TAF7LQ5H9L4 462 aa21.13■□□□□ 0.97
CCNF-203ENST00000564236 RIPOR2Q9Y4F9 1068 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms