RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 LMBR1LQ6UX01 489 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 SAMD7Q7Z3H4 446 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 MPHOSPH8Q99549 860 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
TPM1-212ENST00000558347 PGAP2Q9UHJ9 254 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 TRPM7Q96QT4 1865 aa12.87□□□□□ -0.35
TPM1-212ENST00000558347 H7C1D1 291 aa12.86□□□□□ -0.35
TPM1-212ENST00000558347 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
TPM1-212ENST00000558347 KLRK1P26718 216 aa12.86□□□□□ -0.35
TPM1-212ENST00000558347 TXNRD3Q86VQ6 643 aa12.86□□□□□ -0.35
TPM1-212ENST00000558347 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
TPM1-212ENST00000558347 CHMP3Q9Y3E7 222 aa12.86□□□□□ -0.35
TPM1-212ENST00000558347 PTPRCP08575 1304 aa12.86□□□□□ -0.35
TPM1-212ENST00000558347 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
TPM1-212ENST00000558347 CHRNDQ07001 517 aa12.85□□□□□ -0.35
TPM1-212ENST00000558347 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
TPM1-212ENST00000558347 TBC1D10BQ4KMP7 808 aaPredicted RBP12.85□□□□□ -0.35
TPM1-212ENST00000558347 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
TPM1-212ENST00000558347 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
TPM1-212ENST00000558347 KAZALD1Q96I82 304 aa12.85□□□□□ -0.35
TPM1-212ENST00000558347 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
TPM1-212ENST00000558347 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
TPM1-212ENST00000558347 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
TPM1-212ENST00000558347 SNAP23O00161 211 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 TAF5LO75529 589 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 C20orf194Q5TEA3 1177 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 CST9Q5W186 159 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 RSBN1LQ6PCB5 846 aaPredicted RBP12.84□□□□□ -0.35
TPM1-212ENST00000558347 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
TPM1-212ENST00000558347 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
TPM1-212ENST00000558347 ANKRD2Q9GZV1 360 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
TPM1-212ENST00000558347 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 UTYO14607 1347 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 ZNF609O15014 1411 aa12.84□□□□□ -0.35
TPM1-212ENST00000558347 VEGFBP49765 207 aa12.83□□□□□ -0.35
TPM1-212ENST00000558347 RBM26Q5T8P6 1007 aaKnown RBP12.83□□□□□ -0.35
TPM1-212ENST00000558347 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.35
TPM1-212ENST00000558347 GMLQ99445 158 aa12.83□□□□□ -0.35
TPM1-212ENST00000558347 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 TRIM27P14373 513 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 CCDC57Q2TAC2 916 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 DLK2Q6UY11 383 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 AGBL3Q8NEM8 1001 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
TPM1-212ENST00000558347 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
TPM1-212ENST00000558347 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 POLR2AP24928 1970 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 AAMPQ13685 434 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 DDRGK1Q96HY6 314 aa12.82□□□□□ -0.36
TPM1-212ENST00000558347 API5Q9BZZ5 524 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
TPM1-212ENST00000558347 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
TPM1-212ENST00000558347 KCNJ4P48050 445 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
TPM1-212ENST00000558347 PUS3Q9BZE2 481 aaKnown RBP12.81□□□□□ -0.36
TPM1-212ENST00000558347 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
TPM1-212ENST00000558347 RLBP1P12271 317 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
TPM1-212ENST00000558347 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
TPM1-212ENST00000558347 ADM5C9JUS6 153 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
TPM1-212ENST00000558347 KRT26Q7Z3Y9 468 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
TPM1-212ENST00000558347 WDR33Q9C0J8 1336 aaKnown RBP12.79□□□□□ -0.36
TPM1-212ENST00000558347 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 GGA3Q9NZ52 723 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
TPM1-212ENST00000558347 GTF2IP78347 998 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 SCARF1Q14162 830 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
TPM1-212ENST00000558347 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 CYP4F22Q6NT55 531 aa12.78□□□□□ -0.36
TPM1-212ENST00000558347 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms