RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 SNAP23O00161 211 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 PANK1Q8TE04 598 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 PUS3Q9BZE2 481 aaKnown RBP28.17■■■□□ 2.1
PABPN1-206ENST00000556809 CNNM1Q9NRU3 951 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 CNOT7Q9UIV1 285 aaKnown RBP28.17■■■□□ 2.1
PABPN1-206ENST00000556809 CLEC11AQ9Y240 323 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 ZNF609O15014 1411 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 PASKQ96RG2 1323 aa28.17■■■□□ 2.1
PABPN1-206ENST00000556809 SHTN1A0MZ66 631 aa28.16■■■□□ 2.1
PABPN1-206ENST00000556809 RPS12P25398 132 aaKnown RBP28.16■■■□□ 2.1
PABPN1-206ENST00000556809 C15orf52Q6ZUT6 534 aaKnown RBP28.16■■■□□ 2.1
PABPN1-206ENST00000556809 ITPRIPQ8IWB1 547 aa28.16■■■□□ 2.1
PABPN1-206ENST00000556809 RIPOR2Q9Y4F9 1068 aa28.16■■■□□ 2.1
PABPN1-206ENST00000556809 GNAI3P08754 354 aa28.15■■■□□ 2.1
PABPN1-206ENST00000556809 COA1Q9GZY4 146 aa28.15■■■□□ 2.1
PABPN1-206ENST00000556809 HDAC5Q9UQL6 1122 aa28.15■■■□□ 2.1
PABPN1-206ENST00000556809 HIRAP54198 1017 aaPredicted RBP28.14■■■□□ 2.1
PABPN1-206ENST00000556809 MAP1SQ66K74 1059 aaPredicted RBP28.14■■■□□ 2.1
PABPN1-206ENST00000556809 MICALL2Q8IY33 904 aa28.14■■■□□ 2.1
PABPN1-206ENST00000556809 DNAJC5GQ8N7S2 189 aa28.14■■■□□ 2.1
PABPN1-206ENST00000556809 KCNJ4P48050 445 aa28.13■■■□□ 2.09
PABPN1-206ENST00000556809 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
PABPN1-206ENST00000556809 HTRA3P83110 453 aa28.13■■■□□ 2.09
PABPN1-206ENST00000556809 CNTROBQ8N137 903 aa28.13■■■□□ 2.09
PABPN1-206ENST00000556809 RSBN1LQ6PCB5 846 aaPredicted RBP28.12■■■□□ 2.09
PABPN1-206ENST00000556809 TRPM4Q8TD43 1214 aa28.12■■■□□ 2.09
PABPN1-206ENST00000556809 GMLQ99445 158 aa28.12■■■□□ 2.09
PABPN1-206ENST00000556809 PGAP2Q9UHJ9 254 aa28.12■■■□□ 2.09
PABPN1-206ENST00000556809 USP17L3A6NCW0 530 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 USP17L4A6NCW7 530 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 H7C1D1 291 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 LRRC24Q50LG9 513 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 USP17L1Q7RTZ2 530 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 AGBL3Q8NEM8 1001 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 KLHDC4Q8TBB5 520 aa28.11■■■□□ 2.09
PABPN1-206ENST00000556809 LRRFIP2Q9Y608 721 aaKnown RBP28.11■■■□□ 2.09
PABPN1-206ENST00000556809 PDE3AQ14432 1141 aa28.1■■■□□ 2.09
PABPN1-206ENST00000556809 MROH5Q6ZUA9 1318 aa28.1■■■□□ 2.09
PABPN1-206ENST00000556809 DACT2Q5SW24 774 aa28.09■■■□□ 2.09
PABPN1-206ENST00000556809 EGFRP00533 1210 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 RRP1P56182 461 aaKnown RBP28.08■■■□□ 2.09
PABPN1-206ENST00000556809 PTPN12Q05209 780 aaKnown RBP28.08■■■□□ 2.09
PABPN1-206ENST00000556809 UBE4AQ14139 1066 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 MVPQ14764 893 aaKnown RBP28.08■■■□□ 2.09
PABPN1-206ENST00000556809 C20orf194Q5TEA3 1177 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 STRIP1Q5VSL9 837 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 SAMD7Q7Z3H4 446 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 VGLL2Q8N8G2 317 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 ZC3H15Q8WU90 426 aaKnown RBP28.08■■■□□ 2.09
PABPN1-206ENST00000556809 CD209Q9NNX6 404 aa28.08■■■□□ 2.09
PABPN1-206ENST00000556809 ZBTB7BO15156 539 aaPredicted RBP28.07■■■□□ 2.08
PABPN1-206ENST00000556809 ZNF280AP59817 542 aaPredicted RBP28.07■■■□□ 2.08
PABPN1-206ENST00000556809 COG6Q9Y2V7 657 aa28.07■■■□□ 2.08
PABPN1-206ENST00000556809 GNAI2P04899 355 aa28.06■■■□□ 2.08
PABPN1-206ENST00000556809 IL1R1P14778 569 aa28.05■■■□□ 2.08
PABPN1-206ENST00000556809 TBC1D10BQ4KMP7 808 aaPredicted RBP28.04■■■□□ 2.08
PABPN1-206ENST00000556809 MXD3Q9BW11 206 aa28.04■■■□□ 2.08
PABPN1-206ENST00000556809 CREBZFQ9NS37 354 aa28.04■■■□□ 2.08
PABPN1-206ENST00000556809 DDX19BQ9UMR2 479 aa28.04■■■□□ 2.08
PABPN1-206ENST00000556809 EYA2O00167 538 aa28.03■■■□□ 2.08
PABPN1-206ENST00000556809 PDE8BO95263 885 aa28.03■■■□□ 2.08
PABPN1-206ENST00000556809 TTLL5Q6EMB2 1281 aa28.03■■■□□ 2.08
PABPN1-206ENST00000556809 ATG9AQ7Z3C6 839 aa28.03■■■□□ 2.08
PABPN1-206ENST00000556809 ZNF804AQ7Z570 1209 aa28.03■■■□□ 2.08
PABPN1-206ENST00000556809 POLR2AP24928 1970 aaKnown RBP28.02■■■□□ 2.08
PABPN1-206ENST00000556809 MYO3BQ8WXR4 1341 aa28.02■■■□□ 2.08
PABPN1-206ENST00000556809 USP17L8P0C7I0 530 aa28.02■■■□□ 2.08
PABPN1-206ENST00000556809 MTX1Q13505 466 aa28.02■■■□□ 2.08
PABPN1-206ENST00000556809 METTL24Q5JXM2 366 aa28.02■■■□□ 2.08
PABPN1-206ENST00000556809 FAM84BQ96KN1 310 aaPredicted RBP28.02■■■□□ 2.08
PABPN1-206ENST00000556809 TRPM7Q96QT4 1865 aa28.02■■■□□ 2.08
PABPN1-206ENST00000556809 GTF2IP78347 998 aa28.01■■■□□ 2.07
PABPN1-206ENST00000556809 FMR1Q06787 632 aaKnown RBP eCLIP28.01■■■□□ 2.07
PABPN1-206ENST00000556809 KLRG1Q96E93 195 aa28.01■■■□□ 2.07
PABPN1-206ENST00000556809 FBXO3Q9UK99 471 aa28.01■■■□□ 2.07
PABPN1-206ENST00000556809 KIF4BQ2VIQ3 1234 aa28■■■□□ 2.07
PABPN1-206ENST00000556809 RBM26Q5T8P6 1007 aaKnown RBP28■■■□□ 2.07
PABPN1-206ENST00000556809 COPRSQ9NQ92 184 aa28■■■□□ 2.07
PABPN1-206ENST00000556809 TMEM88BA6NKF7 163 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 TRAF5O00463 557 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 CIAO1O76071 339 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 GYG1P46976 350 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 FBXW7Q969H0 707 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 C1orf115Q9H7X2 142 aa27.99■■■□□ 2.07
PABPN1-206ENST00000556809 FGFR2P21802 821 aa27.98■■■□□ 2.07
PABPN1-206ENST00000556809 TDRD7Q8NHU6 1098 aaKnown RBP27.98■■■□□ 2.07
PABPN1-206ENST00000556809 GLIS2Q9BZE0 524 aaPredicted RBP27.98■■■□□ 2.07
PABPN1-206ENST00000556809 CHMP4BQ9H444 224 aaKnown RBP27.98■■■□□ 2.07
PABPN1-206ENST00000556809 MYOZ2Q9NPC6 264 aa27.98■■■□□ 2.07
PABPN1-206ENST00000556809 SRGAP3O43295 1099 aa27.97■■■□□ 2.07
PABPN1-206ENST00000556809 HIBADHP31937 336 aaKnown RBP27.97■■■□□ 2.07
PABPN1-206ENST00000556809 CDC37L1Q7L3B6 337 aa27.97■■■□□ 2.07
PABPN1-206ENST00000556809 FBXO33Q7Z6M2 555 aa27.97■■■□□ 2.07
PABPN1-206ENST00000556809 CERS5Q8N5B7 392 aa27.97■■■□□ 2.07
PABPN1-206ENST00000556809 PA2G4Q9UQ80 394 aaKnown RBP27.97■■■□□ 2.07
PABPN1-206ENST00000556809 SASH1O94885 1247 aa27.96■■■□□ 2.07
PABPN1-206ENST00000556809 SIL1Q9H173 461 aa27.96■■■□□ 2.07
PABPN1-206ENST00000556809 MMP14P50281 582 aa27.95■■■□□ 2.06
PABPN1-206ENST00000556809 FKBP1AP62942 108 aaKnown RBP27.95■■■□□ 2.06
PABPN1-206ENST00000556809 PUM3Q15397 648 aaKnown RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms