RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DTHD1Q6ZMT9 781 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 MICALL1Q8N3F8 863 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 GOLGA6L1Q8N7Z2 621 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 NXPE3Q969Y0 559 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 COL25A1Q9BXS0 654 aaPredicted RBP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 RASSF4Q9H2L5 321 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 GDF2Q9UK05 429 aaPredicted RBP8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 IGF1RP08069 1367 aa8.72□□□□□ -1.01
CKS1BP1-201ENST00000555221 NEURL1BA8MQ27 555 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 NFKBIEO00221 500 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 CPB1P15086 417 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 MEI1Q5TIA1 1274 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 HS2ST1Q7LGA3 356 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 METTL16Q86W50 562 aaKnown RBP8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 C3orf58Q8NDZ4 430 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 ANKRD24Q8TF21 1146 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 IRF7Q92985 503 aa8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 TTF2Q9UNY4 1162 aaKnown RBP8.71□□□□□ -1.02
CKS1BP1-201ENST00000555221 ELOA3CA0A087WX78 387 aaPredicted RBP8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ELOA3DA6NLF2 546 aaPredicted RBP8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ALAS2P22557 587 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ATP11AP98196 1134 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 SRSF11Q05519 484 aaKnown RBP8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ELOA3BQ3SY89 546 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 ELOA3Q8NG57 546 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 PLD4Q96BZ4 506 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 GGA1Q9UJY5 639 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
CKS1BP1-201ENST00000555221 TRPA1O75762 1119 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 ITPKAP23677 461 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 CEP135Q66GS9 1140 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 SLCO4C1Q6ZQN7 724 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 ASAP3Q8TDY4 903 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 C8orf37Q96NL8 207 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 HHIPQ96QV1 700 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 MDFIQ99750 246 aa8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 NOC4LQ9BVI4 516 aaKnown RBP8.69□□□□□ -1.02
CKS1BP1-201ENST00000555221 A0A096LPE4 126 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 GRIA4P48058 902 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 RPS26P11Q5JNZ5 115 aaPredicted RBP8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 RNFT1Q5M7Z0 435 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 PERM1Q5SV97 790 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 CEP44Q9C0F1 390 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 TGIF2Q9GZN2 237 aa8.68□□□□□ -1.02
CKS1BP1-201ENST00000555221 PTPRAP18433 802 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 ERBB4Q15303 1308 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 BSNDQ8WZ55 320 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 TTC9Q92623 222 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 POP1Q99575 1024 aaKnown RBP8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 SMG9Q9H0W8 520 aaKnown RBP8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 GGT7Q9UJ14 662 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 NAGPAQ9UK23 515 aa8.67□□□□□ -1.02
CKS1BP1-201ENST00000555221 METTL12A8MUP2 240 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 RLBP1P12271 317 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 RAD51AP2Q09MP3 1159 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 CCDC85BQ15834 202 aaPredicted RBP8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 SPRED3Q2MJR0 410 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 SV2BQ7L1I2 683 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 LPIN3Q9BQK8 851 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 CCSER2Q9H7U1 834 aa8.66□□□□□ -1.02
CKS1BP1-201ENST00000555221 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
CKS1BP1-201ENST00000555221 EPXP11678 715 aa8.65□□□□□ -1.02
CKS1BP1-201ENST00000555221 PWP1Q13610 501 aa8.65□□□□□ -1.02
CKS1BP1-201ENST00000555221 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
CKS1BP1-201ENST00000555221 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CKS1BP1-201ENST00000555221 ADAMTS2O95450 1211 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 KANK3Q6NY19 840 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 ZNF654Q8IZM8 581 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 ADAM19Q9H013 955 aa8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 CLEC4MQ9H2X3 399 aaPredicted RBP8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 DDX41Q9UJV9 622 aaKnown RBP8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.64□□□□□ -1.03
CKS1BP1-201ENST00000555221 TPTE2Q6XPS3 522 aa8.63□□□□□ -1.03
CKS1BP1-201ENST00000555221 ACDQ96AP0 544 aa8.63□□□□□ -1.03
CKS1BP1-201ENST00000555221 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
CKS1BP1-201ENST00000555221 TRIM33Q9UPN9 1127 aa8.63□□□□□ -1.03
CKS1BP1-201ENST00000555221 CDC27P30260 824 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 CABP4P57796 275 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 KRT76Q01546 638 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 PPP2R3AQ06190 1150 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 LACRTQ9GZZ8 138 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 MUC3BQ9H195 1237 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 LRRC4BQ9NT99 713 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 SOX13Q9UN79 622 aa8.62□□□□□ -1.03
CKS1BP1-201ENST00000555221 FBXO24O75426 580 aa8.61□□□□□ -1.03
CKS1BP1-201ENST00000555221 GNL2Q13823 731 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms