RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 KRT26Q7Z3Y9 468 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 ANKRD2Q9GZV1 360 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 COA1Q9GZY4 146 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 MYO3BQ8WXR4 1341 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 ZNF521Q96K83 1311 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 PITPNM2Q9BZ72 1349 aa8.42□□□□□ -1.06
SLIRP-203ENST00000554074 LAMB1P07942 1786 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 ARAP2Q8WZ64 1704 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 USP17L8P0C7I0 530 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 LBX1P52954 281 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
SLIRP-203ENST00000554074 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 BEND3Q5T5X7 828 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 STRIP1Q5VSL9 837 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 PAXIP1Q6ZW49 1069 aaPredicted RBP8.41□□□□□ -1.06
SLIRP-203ENST00000554074 USP48Q86UV5 1035 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 MPHOSPH8Q99549 860 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 BEGAINQ9BUH8 593 aa8.41□□□□□ -1.06
SLIRP-203ENST00000554074 SPINK5Q9NQ38 1064 aaPredicted RBP8.41□□□□□ -1.06
SLIRP-203ENST00000554074 ZNF804BA4D1E1 1349 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 ANKRD18BA2A2Z9 1011 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 NOGQ13253 232 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 DACT2Q5SW24 774 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
SLIRP-203ENST00000554074 C15orf52Q6ZUT6 534 aaKnown RBP8.4□□□□□ -1.06
SLIRP-203ENST00000554074 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 ZNF408Q9H9D4 720 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 GBA2Q9HCG7 927 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-203ENST00000554074 MYOZ2Q9NPC6 264 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 GGA3Q9NZ52 723 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.06
SLIRP-203ENST00000554074 MYH13Q9UKX3 1938 aa8.4□□□□□ -1.06
SLIRP-203ENST00000554074 IRS2Q9Y4H2 1338 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 GRM8O00222 908 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 AOC2O75106 756 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 HUNKP57058 714 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 FKBP1BP68106 108 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 FOXO4P98177 505 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 CHRNDQ07001 517 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
SLIRP-203ENST00000554074 SCARF1Q14162 830 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 ANGEL2Q5VTE6 544 aaKnown RBP8.39□□□□□ -1.07
SLIRP-203ENST00000554074 RGMBQ6NW40 437 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 FAM9BQ8IZU0 186 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
SLIRP-203ENST00000554074 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
SLIRP-203ENST00000554074 FAM155AB1AL88 458 aaPredicted RBP8.38□□□□□ -1.07
SLIRP-203ENST00000554074 ADM5C9JUS6 153 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 F6X3S4 739 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 GRM1Q13255 1194 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
SLIRP-203ENST00000554074 COL1A1P02452 1464 aaPredicted RBP8.38□□□□□ -1.07
SLIRP-203ENST00000554074 UTYO14607 1347 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 ASTN2O75129 1339 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-203ENST00000554074 PTPRCP08575 1304 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 NPM3O75607 178 aaKnown RBP8.37□□□□□ -1.07
SLIRP-203ENST00000554074 KLRK1P26718 216 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 KCNJ4P48050 445 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 FKBP1AP62942 108 aaKnown RBP8.37□□□□□ -1.07
SLIRP-203ENST00000554074 LMBR1LQ6UX01 489 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 DLK2Q6UY11 383 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 REM2Q8IYK8 340 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-203ENST00000554074 SRCIN1Q9C0H9 1055 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 SAGE1Q9NXZ1 904 aa8.37□□□□□ -1.07
SLIRP-203ENST00000554074 C9orf78Q9NZ63 289 aaPredicted RBP8.37□□□□□ -1.07
SLIRP-203ENST00000554074 E9PSI1 815 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 WNT10BO00744 389 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 SLC34A2O95436 690 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 SLC10A3P09131 477 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 IL1R1P14778 569 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 ZNF157P51786 506 aaPredicted RBP8.36□□□□□ -1.07
SLIRP-203ENST00000554074 CCDC57Q2TAC2 916 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 EPHA10Q5JZY3 1008 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 ZBED3Q96IU2 234 aaPredicted RBP8.36□□□□□ -1.07
SLIRP-203ENST00000554074 HDAC9Q9UKV0 1011 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
SLIRP-203ENST00000554074 GTF2IP78347 998 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 NBPF9Q3BBW0 867 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 RABL6Q3YEC7 729 aaPredicted RBP8.35□□□□□ -1.07
SLIRP-203ENST00000554074 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 SLC4A10Q6U841 1118 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 LDHAL6AQ6ZMR3 332 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 ZNF804AQ7Z570 1209 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 APOBEC3FQ8IUX4 373 aaKnown RBP8.35□□□□□ -1.07
SLIRP-203ENST00000554074 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
SLIRP-203ENST00000554074 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 ABHD8Q96I13 439 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 ZIC5Q96T25 663 aa8.35□□□□□ -1.07
SLIRP-203ENST00000554074 TAF5LO75529 589 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 NF2P35240 595 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 SLFN5Q08AF3 891 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 UBE4AQ14139 1066 aa8.34□□□□□ -1.07
SLIRP-203ENST00000554074 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms