RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 GPR101Q96P66 508 aaPredicted RBP33.91■■■■□ 3.02
CCM2-218ENST00000541586 PODXL2Q9NZ53 605 aa33.91■■■■□ 3.02
CCM2-218ENST00000541586 FPGT-TNNI3KV9GXZ4 949 aa33.91■■■■□ 3.02
CCM2-218ENST00000541586 CDC45O75419 566 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 DCAF8L1A6NGE4 600 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 GRIPAP1Q4V328 841 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 TBC1D9Q6ZT07 1266 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 TBC1D16Q8TBP0 767 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 GPATCH3Q96I76 525 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 ECHDC1Q9NTX5 307 aa33.9■■■■□ 3.02
CCM2-218ENST00000541586 TLR7Q9NYK1 1049 aaKnown RBP33.9■■■■□ 3.02
CCM2-218ENST00000541586 ATP2B4P23634 1241 aa33.89■■■■□ 3.02
CCM2-218ENST00000541586 VGLL2Q8N8G2 317 aa33.89■■■■□ 3.02
CCM2-218ENST00000541586 ARFGEF1Q9Y6D6 1849 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 GRIN3BO60391 1043 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 RASSF7Q02833 373 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 TAOK3Q9H2K8 898 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 LEMD3Q9Y2U8 911 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 ZNF804BA4D1E1 1349 aa33.88■■■■□ 3.01
CCM2-218ENST00000541586 NFKBIEO00221 500 aa33.87■■■■□ 3.01
CCM2-218ENST00000541586 FKBP4Q02790 459 aaKnown RBP eCLIP33.87■■■■□ 3.01
CCM2-218ENST00000541586 ZNF277Q9NRM2 450 aaPredicted RBP33.87■■■■□ 3.01
CCM2-218ENST00000541586 RIMBP2O15034 1052 aa33.87■■■■□ 3.01
CCM2-218ENST00000541586 GPR108Q9NPR9 543 aa33.87■■■■□ 3.01
CCM2-218ENST00000541586 ERC2O15083 957 aa33.86■■■■□ 3.01
CCM2-218ENST00000541586 GLRX3O76003 335 aaKnown RBP33.86■■■■□ 3.01
CCM2-218ENST00000541586 LRRC37AA6NMS7 1700 aa33.86■■■■□ 3.01
CCM2-218ENST00000541586 PSMD1Q99460 953 aa33.85■■■■□ 3.01
CCM2-218ENST00000541586 WASHC4Q2M389 1173 aa33.84■■■■□ 3.01
CCM2-218ENST00000541586 SUPT20HQ8NEM7 779 aa33.84■■■■□ 3.01
CCM2-218ENST00000541586 DBNLQ9UJU6 430 aaKnown RBP33.84■■■■□ 3.01
CCM2-218ENST00000541586 TRIM6-TRIM34B2RNG4 842 aa33.84■■■■□ 3.01
CCM2-218ENST00000541586 TIMM10P62072 90 aa33.84■■■■□ 3.01
CCM2-218ENST00000541586 PUM3Q15397 648 aaKnown RBP33.84■■■■□ 3.01
CCM2-218ENST00000541586 RTFDC1Q9BY42 306 aaPredicted RBP33.84■■■■□ 3.01
CCM2-218ENST00000541586 SNED1Q8TER0 1413 aa33.83■■■■□ 3.01
CCM2-218ENST00000541586 UBE4AQ14139 1066 aa33.83■■■■□ 3.01
CCM2-218ENST00000541586 NEUROD6Q96NK8 337 aa33.83■■■■□ 3.01
CCM2-218ENST00000541586 ATP2B3Q16720 1220 aa33.82■■■■□ 3
CCM2-218ENST00000541586 RILPL2Q969X0 211 aa33.82■■■■□ 3
CCM2-218ENST00000541586 EYA3Q99504 573 aa33.82■■■■□ 3
CCM2-218ENST00000541586 ZC3H12CQ9C0D7 883 aaKnown RBP33.82■■■■□ 3
CCM2-218ENST00000541586 AKAP2Q9Y2D5 859 aa33.82■■■■□ 3
CCM2-218ENST00000541586 KLRK1P26718 216 aa33.82■■■■□ 3
CCM2-218ENST00000541586 MFAP1P55081 439 aaKnown RBP33.82■■■■□ 3
CCM2-218ENST00000541586 AOC3Q16853 763 aa33.82■■■■□ 3
CCM2-218ENST00000541586 UPF2Q9HAU5 1272 aaKnown RBP33.81■■■■□ 3
CCM2-218ENST00000541586 ZNF609O15014 1411 aa33.81■■■■□ 3
CCM2-218ENST00000541586 PPIP5K2O43314 1243 aa33.8■■■■□ 3
CCM2-218ENST00000541586 TXNRD3Q86VQ6 643 aa33.8■■■■□ 3
CCM2-218ENST00000541586 LPIN2Q92539 896 aa33.8■■■■□ 3
CCM2-218ENST00000541586 DBNDD2Q9BQY9 259 aa33.8■■■■□ 3
CCM2-218ENST00000541586 A0A1B0GUL7 405 aa33.79■■■■□ 3
CCM2-218ENST00000541586 MAP4K4O95819 1239 aaPredicted RBP33.79■■■■□ 3
CCM2-218ENST00000541586 IFIT1P09914 478 aaKnown RBP33.79■■■■□ 3
CCM2-218ENST00000541586 SLC5A1P13866 664 aa33.79■■■■□ 3
CCM2-218ENST00000541586 FGFR2P21802 821 aa33.79■■■■□ 3
CCM2-218ENST00000541586 FER1L6Q2WGJ9 1857 aa33.79■■■■□ 3
CCM2-218ENST00000541586 CASC1Q6TDU7 716 aa33.78■■■■□ 3
CCM2-218ENST00000541586 G3V3G9 751 aa33.77■■■■□ 3
CCM2-218ENST00000541586 IARSP41252 1262 aaKnown RBP33.77■■■■□ 3
CCM2-218ENST00000541586 DCAF8Q5TAQ9 597 aa33.77■■■■□ 3
CCM2-218ENST00000541586 LARGE2Q8N3Y3 721 aa33.77■■■■□ 3
CCM2-218ENST00000541586 DUOX1Q9NRD9 1551 aa33.77■■■■□ 3
CCM2-218ENST00000541586 ANP32AP39687 249 aaKnown RBP33.76■■■■□ 3
CCM2-218ENST00000541586 PRELPP51888 382 aa33.76■■■■□ 3
CCM2-218ENST00000541586 LTBP3Q9NS15 1303 aa33.76■■■■□ 3
CCM2-218ENST00000541586 DOK7Q18PE1 504 aa33.76■■■□□ 2.99
CCM2-218ENST00000541586 CNTROBQ8N137 903 aa33.76■■■□□ 2.99
CCM2-218ENST00000541586 ADORA1P30542 326 aa33.75■■■□□ 2.99
CCM2-218ENST00000541586 GYG1P46976 350 aa33.75■■■□□ 2.99
CCM2-218ENST00000541586 KIAA2012Q0VF49 1180 aa33.75■■■□□ 2.99
CCM2-218ENST00000541586 LTBP1Q14766 1721 aa33.75■■■□□ 2.99
CCM2-218ENST00000541586 LMNB1P20700 586 aa33.74■■■□□ 2.99
CCM2-218ENST00000541586 VPS37DQ86XT2 251 aa33.74■■■□□ 2.99
CCM2-218ENST00000541586 XAGE2Q96GT9 111 aa33.74■■■□□ 2.99
CCM2-218ENST00000541586 A0A1B0GUL6 1792 aa33.74■■■□□ 2.99
CCM2-218ENST00000541586 ATP5JP18859 108 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 BOLA2Q9H3K6 86 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 DBNDD1Q9H9R9 158 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 CAVIN4Q5BKX8 364 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 GORABQ5T7V8 394 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 TBC1D32Q96NH3 1257 aa33.73■■■□□ 2.99
CCM2-218ENST00000541586 AK9Q5TCS8 1911 aa33.72■■■□□ 2.99
CCM2-218ENST00000541586 MED23Q9ULK4 1368 aa33.72■■■□□ 2.99
CCM2-218ENST00000541586 BCAMP50895 628 aa33.72■■■□□ 2.99
CCM2-218ENST00000541586 FAM84BQ96KN1 310 aaPredicted RBP33.72■■■□□ 2.99
CCM2-218ENST00000541586 CHMLP26374 656 aa33.71■■■□□ 2.99
CCM2-218ENST00000541586 JDP2Q8WYK2 163 aa33.71■■■□□ 2.99
CCM2-218ENST00000541586 VPS33BQ9H267 617 aa33.71■■■□□ 2.99
CCM2-218ENST00000541586 RNF181Q9P0P0 153 aa33.71■■■□□ 2.99
CCM2-218ENST00000541586 HIBADHP31937 336 aaKnown RBP33.7■■■□□ 2.98
CCM2-218ENST00000541586 C9orf131Q5VYM1 1079 aa33.7■■■□□ 2.98
CCM2-218ENST00000541586 IRS2Q9Y4H2 1338 aa33.69■■■□□ 2.98
CCM2-218ENST00000541586 EIF5BO60841 1220 aaKnown RBP33.69■■■□□ 2.98
CCM2-218ENST00000541586 C15orf52Q6ZUT6 534 aaKnown RBP33.69■■■□□ 2.98
CCM2-218ENST00000541586 ZNF804AQ7Z570 1209 aa33.69■■■□□ 2.98
CCM2-218ENST00000541586 NIM1KQ8IY84 436 aa33.68■■■□□ 2.98
CCM2-218ENST00000541586 EVI5LQ96CN4 794 aa33.68■■■□□ 2.98
CCM2-218ENST00000541586 C22orf23Q9BZE7 217 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms