RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 CLSTN2Q9H4D0 955 aa16.59■□□□□ 0.25
INO80E-203ENST00000540562 KDM3BQ7LBC6 1761 aa16.58■□□□□ 0.25
INO80E-203ENST00000540562 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 MARCKSP29966 332 aaPredicted RBP16.58■□□□□ 0.24
INO80E-203ENST00000540562 MYRIPQ8NFW9 859 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 NKX2-3Q8TAU0 364 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 DYNC1I1O14576 645 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 KRT32Q14532 448 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 KIF3AQ9Y496 699 aa16.58■□□□□ 0.24
INO80E-203ENST00000540562 ZAP70P43403 619 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 CCDC57Q2TAC2 916 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
INO80E-203ENST00000540562 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 USP27XA6NNY8 438 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
INO80E-203ENST00000540562 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
INO80E-203ENST00000540562 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
INO80E-203ENST00000540562 MED1Q15648 1581 aaPredicted RBP16.57■□□□□ 0.24
INO80E-203ENST00000540562 CHAF1AQ13111 956 aaPredicted RBP16.56■□□□□ 0.24
INO80E-203ENST00000540562 TPD52L1Q16890 204 aaPredicted RBP16.56■□□□□ 0.24
INO80E-203ENST00000540562 PPP4R3BQ5MIZ7 849 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 ZBTB9Q96C00 473 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 GOLGA8BA8MQT2 603 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
INO80E-203ENST00000540562 AOPEPQ8N6M6 819 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 ZNF75DP51815 510 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 TOMM22Q9NS69 142 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 TMEM94Q12767 1356 aa16.56■□□□□ 0.24
INO80E-203ENST00000540562 CPLX1O14810 134 aa16.55■□□□□ 0.24
INO80E-203ENST00000540562 PDIA3P30101 505 aaKnown RBP16.55■□□□□ 0.24
INO80E-203ENST00000540562 DDX19AQ9NUU7 478 aaKnown RBP16.55■□□□□ 0.24
INO80E-203ENST00000540562 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
INO80E-203ENST00000540562 EYA2O00167 538 aa16.55■□□□□ 0.24
INO80E-203ENST00000540562 XAGE2Q96GT9 111 aa16.55■□□□□ 0.24
INO80E-203ENST00000540562 CASP7P55210 303 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 EVA1CP58658 441 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
INO80E-203ENST00000540562 ASAP1Q9ULH1 1129 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.248e-9■■■□□ 17.2
INO80E-203ENST00000540562 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 ZSCAN25Q6NSZ9 544 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 PHKBQ93100 1093 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 SENP2Q9HC62 589 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 CFAP45Q9UL16 551 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 IQSEC3Q9UPP2 1182 aaPredicted RBP16.54■□□□□ 0.24
INO80E-203ENST00000540562 C1orf167Q5SNV9 1468 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 STK38Q15208 465 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
INO80E-203ENST00000540562 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
INO80E-203ENST00000540562 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
INO80E-203ENST00000540562 FGAP02671 866 aa16.53■□□□□ 0.24
INO80E-203ENST00000540562 TNNT1P13805 278 aa16.53■□□□□ 0.24
INO80E-203ENST00000540562 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
INO80E-203ENST00000540562 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
INO80E-203ENST00000540562 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
INO80E-203ENST00000540562 PRC1O43663 620 aa16.53■□□□□ 0.24
INO80E-203ENST00000540562 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
INO80E-203ENST00000540562 RRP12Q5JTH9 1297 aaKnown RBP16.53■□□□□ 0.24
INO80E-203ENST00000540562 NCAPD2Q15021 1401 aa16.52■□□□□ 0.24
INO80E-203ENST00000540562 PFKFB2O60825 505 aa16.52■□□□□ 0.24
INO80E-203ENST00000540562 SMC2O95347 1197 aa16.52■□□□□ 0.24
INO80E-203ENST00000540562 NDUFA8P51970 172 aa16.52■□□□□ 0.24
INO80E-203ENST00000540562 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
INO80E-203ENST00000540562 FDPSP14324 419 aaKnown RBP16.52■□□□□ 0.23
INO80E-203ENST00000540562 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.23
INO80E-203ENST00000540562 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.23
INO80E-203ENST00000540562 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.23
INO80E-203ENST00000540562 ORC3Q9UBD5 711 aaPredicted RBP16.52■□□□□ 0.23
INO80E-203ENST00000540562 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.23
INO80E-203ENST00000540562 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.23
INO80E-203ENST00000540562 C5P01031 1676 aa16.52■□□□□ 0.23
INO80E-203ENST00000540562 GOLGA8FQ08AF8 430 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 GOLGA8DPQ0D2H9 430 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
INO80E-203ENST00000540562 ATP2B3Q16720 1220 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 ZMYM1Q5SVZ6 1142 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 C8orf76Q96K31 380 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 ZKSCAN3Q9BRR0 538 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 ELP1O95163 1332 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 H7C1W4 665 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
INO80E-203ENST00000540562 HLFQ16534 295 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 DPCR1Q3MIW9 517 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 TMX1Q9H3N1 280 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 CNNM1Q9NRU3 951 aa16.51■□□□□ 0.23
INO80E-203ENST00000540562 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
INO80E-203ENST00000540562 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
INO80E-203ENST00000540562 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
INO80E-203ENST00000540562 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
INO80E-203ENST00000540562 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms