RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
SCNN1A-215ENST00000540037 GCKRQ14397 625 aa16.27■□□□□ 0.19
SCNN1A-215ENST00000540037 RAB11FIP4Q86YS3 637 aa16.27■□□□□ 0.19
SCNN1A-215ENST00000540037 PPP1R13BQ96KQ4 1090 aa16.27■□□□□ 0.19
SCNN1A-215ENST00000540037 POLR3DP05423 398 aaPredicted RBP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 XAGE3Q8WTP9 111 aa16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 FAM53CQ9NYF3 392 aa16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 NAA16Q6N069 864 aaPredicted RBP16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 CLIC4Q9Y696 253 aa16.26■□□□□ 0.19
SCNN1A-215ENST00000540037 DHX32Q7L7V1 743 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-215ENST00000540037 DDX58O95786 925 aaKnown RBP16.25■□□□□ 0.19
SCNN1A-215ENST00000540037 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
SCNN1A-215ENST00000540037 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
SCNN1A-215ENST00000540037 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 FDPSP14324 419 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 GOLGA8FQ08AF8 430 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 GOLGA8DPQ0D2H9 430 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 TBX22Q9Y458 520 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 GOLIM4O00461 696 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 NEDD4P46934 1319 aa16.24■□□□□ 0.19
SCNN1A-215ENST00000540037 PDIA3P30101 505 aaKnown RBP16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 LLPHQ9BRT6 129 aaKnown RBP16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 FANCGO15287 622 aa16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 LMOD1P29536 600 aaPredicted RBP16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 CLCN6P51797 869 aa16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 ZNF396Q96N95 335 aaPredicted RBP16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
SCNN1A-215ENST00000540037 SALL1Q9NSC2 1324 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 E7EWF7 191 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 HAUS7Q99871 368 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 EPC1Q9H2F5 836 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 KIAA1468Q9P260 1216 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 MYH15Q9Y2K3 1946 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 CARMIL3Q8ND23 1372 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 NEXNQ0ZGT2 675 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 NEUROD6Q96NK8 337 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 FHOD1Q9Y613 1164 aa16.22■□□□□ 0.19
SCNN1A-215ENST00000540037 H2AFXP16104 143 aaPredicted RBP16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 GSDMDP57764 484 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 TIMM10P62072 90 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 L2HGDHQ9H9P8 463 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 COPRSQ9NQ92 184 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 SFPQP23246 707 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 CCDC93Q567U6 631 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 SLIT1O75093 1534 aa16.21■□□□□ 0.19
SCNN1A-215ENST00000540037 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.18
SCNN1A-215ENST00000540037 HOMER1Q86YM7 354 aa16.21■□□□□ 0.18
SCNN1A-215ENST00000540037 LINC00301Q8NCQ3 95 aa16.21■□□□□ 0.18
SCNN1A-215ENST00000540037 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 LMO7Q8WWI1 1683 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 NCAPHQ15003 741 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 SF3A1Q15459 793 aaKnown RBP16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 KBTBD3Q8NAB2 608 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 TRERF1Q96PN7 1200 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 TMEM51Q9NW97 253 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 AXIN2Q9Y2T1 843 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 HAND2P61296 217 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 STK38Q15208 465 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 ADALQ6DHV7 355 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 BBXQ8WY36 941 aaPredicted RBP16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 DPF2Q92785 391 aa16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 METTL22Q9BUU2 404 aaPredicted RBP16.2■□□□□ 0.18
SCNN1A-215ENST00000540037 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 MRC1P22897 1456 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 PSME1Q06323 249 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 FAM177A1Q8N128 213 aaPredicted RBP16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 NFAT5O94916 1531 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 KIF28PB7ZC32 967 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 SEC31AO94979 1220 aaKnown RBP16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 HSD3B7Q9H2F3 369 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
SCNN1A-215ENST00000540037 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 ZNF202O95125 648 aa16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
SCNN1A-215ENST00000540037 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms