RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 LDHBP07195 334 aaKnown RBP19.13■□□□□ 0.65
SCARB1-205ENST00000538291 GNG11P61952 73 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 LRRC59Q96AG4 307 aaKnown RBP19.13■□□□□ 0.65
SCARB1-205ENST00000538291 RNF113AO15541 343 aaKnown RBP19.13■□□□□ 0.65
SCARB1-205ENST00000538291 LMOD1P29536 600 aaPredicted RBP19.13■□□□□ 0.65
SCARB1-205ENST00000538291 TNNI2P48788 182 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 PPP1R14CQ8TAE6 165 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 MRVI1Q9Y6F6 885 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 PRPHP41219 470 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 PPM1EQ8WY54 764 aa19.13■□□□□ 0.65
SCARB1-205ENST00000538291 PLCH2O75038 1416 aa19.12■□□□□ 0.65
SCARB1-205ENST00000538291 CTR9Q6PD62 1173 aa19.12■□□□□ 0.65
SCARB1-205ENST00000538291 RIMBP2O15034 1052 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 MRPL50Q8N5N7 158 aaKnown RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 IGHDP01880 384 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 MTHFSDQ2M296 383 aaKnown RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 SREK1Q8WXA9 508 aaKnown RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 TTC41PQ6P2S7 1318 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 FAM13AO94988 1023 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 KIF4AO95239 1232 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 GNA11P29992 359 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 CEP112Q8N8E3 955 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 CKAP4Q07065 602 aaKnown RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 RNF187Q5TA31 235 aaPredicted RBP19.11■□□□□ 0.65
SCARB1-205ENST00000538291 MAGEB6Q8N7X4 407 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
SCARB1-205ENST00000538291 SPECC1LQ69YQ0 1117 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 HS2ST1Q7LGA3 356 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 HELBQ8NG08 1087 aaPredicted RBP19.1■□□□□ 0.65
SCARB1-205ENST00000538291 PA2G4Q9UQ80 394 aaKnown RBP19.1■□□□□ 0.65
SCARB1-205ENST00000538291 SBNO2Q9Y2G9 1366 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 TTC6Q86TZ1 520 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 CCDC155Q8N6L0 562 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 MIGA1Q8NAN2 632 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 RBM17Q96I25 401 aaKnown RBP19.1■□□□□ 0.65
SCARB1-205ENST00000538291 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
SCARB1-205ENST00000538291 WWC3Q9ULE0 1092 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
SCARB1-205ENST00000538291 RGS22Q8NE09 1264 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■■■■ 29.1
SCARB1-205ENST00000538291 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
SCARB1-205ENST00000538291 SELENOOQ9BVL4 669 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 SH2D4AQ9H788 454 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 MARCKSP29966 332 aaPredicted RBP19.09■□□□□ 0.65
SCARB1-205ENST00000538291 KLHL40Q2TBA0 621 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 TRAPPC3LQ5T215 181 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 CEP63Q96MT8 703 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 GIMAP6Q6P9H5 292 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 KRT2P35908 639 aa19.09■□□□□ 0.65
SCARB1-205ENST00000538291 TTC16Q8NEE8 873 aa19.08■□□□□ 0.65
SCARB1-205ENST00000538291 DHX58Q96C10 678 aa19.08■□□□□ 0.65
SCARB1-205ENST00000538291 POLR3GO15318 223 aaPredicted RBP19.08■□□□□ 0.64
SCARB1-205ENST00000538291 GCP02774 474 aa19.08■□□□□ 0.64
SCARB1-205ENST00000538291 MRPS9P82933 396 aaKnown RBP19.08■□□□□ 0.64
SCARB1-205ENST00000538291 RASAL2Q9UJF2 1139 aa19.08■□□□□ 0.64
SCARB1-205ENST00000538291 MAP3K5Q99683 1374 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 GNPATO15228 680 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 IQCGQ9H095 443 aaKnown RBP19.07■□□□□ 0.64
SCARB1-205ENST00000538291 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
SCARB1-205ENST00000538291 FAM212AQ96EL1 285 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 MSANTD4Q8NCY6 345 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 A2MP01023 1474 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 LMBR1Q8WVP7 490 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 FAM107BQ9H098 131 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 POLKQ9UBT6 870 aa19.07■□□□□ 0.64
SCARB1-205ENST00000538291 A0A1W2PRG0 241 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 BACH1O14867 736 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 SPTLC2O15270 562 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 NAP1L4Q99733 375 aaKnown RBP19.06■□□□□ 0.64
SCARB1-205ENST00000538291 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 BICDL2A1A5D9 508 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 CWF19L2Q2TBE0 894 aaKnown RBP19.06■□□□□ 0.64
SCARB1-205ENST00000538291 C6orf163Q5TEZ5 329 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 CDCA7Q9BWT1 371 aaPredicted RBP19.06■□□□□ 0.64
SCARB1-205ENST00000538291 ZSWIM4Q9H7M6 989 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 DENND2AQ9ULE3 1009 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 CNPY2Q9Y2B0 182 aa19.06■□□□□ 0.64
SCARB1-205ENST00000538291 CNBD1Q8NA66 436 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 CCDC77Q9BR77 488 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 HSF2BPO75031 334 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 TACC1O75410 805 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 TFCP2Q12800 502 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 CEP135Q66GS9 1140 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 TAF12Q16514 161 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 OTUD6BQ8N6M0 293 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 ASXL1Q8IXJ9 1541 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 EEF2P13639 858 aaKnown RBP19.05■□□□□ 0.64
SCARB1-205ENST00000538291 ARL1P40616 181 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-205ENST00000538291 DPH6Q7L8W6 267 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 STK32BQ9NY57 414 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 CCDC171Q6TFL3 1326 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 ANO6Q4KMQ2 910 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 HSP90AA4PQ58FG1 418 aa19.05■□□□□ 0.64
SCARB1-205ENST00000538291 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
SCARB1-205ENST00000538291 APBB1IPQ7Z5R6 666 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-205ENST00000538291 CEP83Q9Y592 693 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms