RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
SKP1-212ENST00000523966 TMEM238LA0A1B0GVL6 79 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 TRPA1O75762 1119 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 ADAMTS2O95450 1211 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 TAF1CQ15572 869 aaPredicted RBP6.33□□□□□ -1.4
SKP1-212ENST00000523966 RNFT1Q5M7Z0 435 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 SLCO4C1Q6ZQN7 724 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 CCNJLQ8IV13 435 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
SKP1-212ENST00000523966 KLF15Q9UIH9 416 aa6.33□□□□□ -1.4
SKP1-212ENST00000523966 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
SKP1-212ENST00000523966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.33□□□□□ -1.4
SKP1-212ENST00000523966 ERBB4Q15303 1308 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 RECKO95980 971 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 ACPPP15309 386 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 PTPRAP18433 802 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 AMPD1P23109 780 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 CABP4P57796 275 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 ATP11AP98196 1134 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 PERM1Q5SV97 790 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 PSAPL1Q6NUJ1 521 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
SKP1-212ENST00000523966 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 CACTIN-AS1Q8N1I8 211 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 GALNT6Q8NCL4 622 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 RNF34Q969K3 372 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 NXPE3Q969Y0 559 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 METTL5Q9NRN9 209 aaKnown RBP6.32□□□□□ -1.4
SKP1-212ENST00000523966 FRRS1LQ9P0K9 344 aa6.32□□□□□ -1.4
SKP1-212ENST00000523966 A0A096LPE4 126 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 A0A1W2PPZ6 126 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 WFS1O76024 890 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 EPXP11678 715 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 ZNF76P36508 570 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 NUDT8Q8WV74 236 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 EDARADDQ8WWZ3 215 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 TCF12Q99081 682 aa6.31□□□□□ -1.4
SKP1-212ENST00000523966 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
SKP1-212ENST00000523966 MAP3K10Q02779 954 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
SKP1-212ENST00000523966 GDF6Q6KF10 455 aaPredicted RBP6.3□□□□□ -1.4
SKP1-212ENST00000523966 KANK3Q6NY19 840 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 DDX54Q8TDD1 881 aaKnown RBP6.3□□□□□ -1.4
SKP1-212ENST00000523966 BSNDQ8WZ55 320 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 ACDQ96AP0 544 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 POP1Q99575 1024 aaKnown RBP6.3□□□□□ -1.4
SKP1-212ENST00000523966 CEP44Q9C0F1 390 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 LACRTQ9GZZ8 138 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 JPH1Q9HDC5 661 aaPredicted RBP6.3□□□□□ -1.4
SKP1-212ENST00000523966 ENAMQ9NRM1 1142 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
SKP1-212ENST00000523966 NFKBIEO00221 500 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 LILRB5O75023 590 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 BCRP11274 1271 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 CDC27P30260 824 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 GRIA4P48058 902 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 ST13P50502 369 aaKnown RBP6.29□□□□□ -1.4
SKP1-212ENST00000523966 SPRED3Q2MJR0 410 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 HS2ST1Q7LGA3 356 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 TTC9Q92623 222 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 LPIN3Q9BQK8 851 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 ABCB6Q9NP58 842 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
SKP1-212ENST00000523966 USP31Q70CQ4 1352 aa6.29□□□□□ -1.4
SKP1-212ENST00000523966 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 OIP5O43482 229 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 CTSHP09668 335 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 RLBP1P12271 317 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 ERCC5P28715 1186 aaPredicted RBP6.28□□□□□ -1.4
SKP1-212ENST00000523966 GMPRP36959 345 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 ARL4DP49703 201 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 PPP2R3AQ06190 1150 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 CCDC85BQ15834 202 aaPredicted RBP6.28□□□□□ -1.4
SKP1-212ENST00000523966 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
SKP1-212ENST00000523966 DIEXFQ68CQ4 756 aaKnown RBP6.28□□□□□ -1.4
SKP1-212ENST00000523966 IL22RA1Q8N6P7 574 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 NEDD1Q8NHV4 660 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 HHIPQ96QV1 700 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 MUC3BQ9H195 1237 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 GGT7Q9UJ14 662 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 NAGPAQ9UK23 515 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 TRIM33Q9UPN9 1127 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
SKP1-212ENST00000523966 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
SKP1-212ENST00000523966 LMNB1P20700 586 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 ITPKAP23677 461 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 KRT76Q01546 638 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 PWP1Q13610 501 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 C9orf131Q5VYM1 1079 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 TPTE2Q6XPS3 522 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 CHSY3Q70JA7 882 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 SV2BQ7L1I2 683 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 RELL1Q8IUW5 271 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 BTBD6Q96KE9 485 aa6.27□□□□□ -1.41
SKP1-212ENST00000523966 CLEC4MQ9H2X3 399 aaPredicted RBP6.27□□□□□ -1.41
SKP1-212ENST00000523966 RRAGCQ9HB90 399 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms