RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 SIN3BO75182 1162 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 GSTT1P30711 240 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
CNOT8-220ENST00000522139 ATP11AP98196 1134 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 PTPN12Q05209 780 aaKnown RBP8.16□□□□□ -1.1
CNOT8-220ENST00000522139 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
CNOT8-220ENST00000522139 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 OXCT2Q9BYC2 517 aaPredicted RBP8.16□□□□□ -1.1
CNOT8-220ENST00000522139 RASSF4Q9H2L5 321 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 ABCB6Q9NP58 842 aa8.16□□□□□ -1.1
CNOT8-220ENST00000522139 METTL12A8MUP2 240 aa8.15□□□□□ -1.1
CNOT8-220ENST00000522139 NFKBIEO00221 500 aa8.15□□□□□ -1.1
CNOT8-220ENST00000522139 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
CNOT8-220ENST00000522139 C3orf58Q8NDZ4 430 aa8.15□□□□□ -1.1
CNOT8-220ENST00000522139 AVENQ9NQS1 362 aaPredicted RBP8.15□□□□□ -1.1
CNOT8-220ENST00000522139 NSFL1CQ9UNZ2 370 aaKnown RBP8.15□□□□□ -1.1
CNOT8-220ENST00000522139 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
CNOT8-220ENST00000522139 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 GHRHP01286 108 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 CPB1P15086 417 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 EIF2AK2P19525 551 aaKnown RBP8.14□□□□□ -1.11
CNOT8-220ENST00000522139 GRIA4P48058 902 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 PCSK7Q16549 785 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 SPRED3Q2MJR0 410 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 DTHD1Q6ZMT9 781 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 FAM35AQ86V20 835 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 TMEM102Q8N9M5 508 aaPredicted RBP8.14□□□□□ -1.11
CNOT8-220ENST00000522139 NXPE3Q969Y0 559 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 MDFIQ99750 246 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 PBX4Q9BYU1 374 aa8.14□□□□□ -1.11
CNOT8-220ENST00000522139 TTF2Q9UNY4 1162 aaKnown RBP8.14□□□□□ -1.11
CNOT8-220ENST00000522139 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 PDE2AO00408 941 aaPredicted RBP8.13□□□□□ -1.11
CNOT8-220ENST00000522139 ARAFP10398 606 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 ADH6P28332 368 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 ASAP3Q8TDY4 903 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 TNFRSF25Q93038 417 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 SLC6A14Q9UN76 642 aa8.13□□□□□ -1.11
CNOT8-220ENST00000522139 XRCC5P13010 732 aaKnown RBP8.12□□□□□ -1.11
CNOT8-220ENST00000522139 ADH7P40394 386 aa8.12□□□□□ -1.11
CNOT8-220ENST00000522139 MAP2K3P46734 347 aa8.12□□□□□ -1.11
CNOT8-220ENST00000522139 ZC3H6P61129 1189 aaKnown RBP8.12□□□□□ -1.11
CNOT8-220ENST00000522139 POP1Q99575 1024 aaKnown RBP8.12□□□□□ -1.11
CNOT8-220ENST00000522139 BHLHE41Q9C0J9 482 aaPredicted RBP8.12□□□□□ -1.11
CNOT8-220ENST00000522139 RBSNQ9H1K0 784 aa8.12□□□□□ -1.11
CNOT8-220ENST00000522139 GGT7Q9UJ14 662 aa8.12□□□□□ -1.11
CNOT8-220ENST00000522139 IGF1RP08069 1367 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 A0A096LPE4 126 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 A0A1W2PPZ6 126 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 FBXO24O75426 580 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 ZNF394Q53GI3 561 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 CEP135Q66GS9 1140 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 MICALL1Q8N3F8 863 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 SVOPQ8N4V2 548 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 TGIF2Q9GZN2 237 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 GGA1Q9UJY5 639 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 NAGPAQ9UK23 515 aa8.11□□□□□ -1.11
CNOT8-220ENST00000522139 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 IGSF3O75054 1194 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
CNOT8-220ENST00000522139 NAALADL2Q58DX5 795 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 PLD4Q96BZ4 506 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
CNOT8-220ENST00000522139 CCSER2Q9H7U1 834 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 PCDHGB7Q9Y5F8 929 aa8.1□□□□□ -1.11
CNOT8-220ENST00000522139 ITPKAP23677 461 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 MAP3K10Q02779 954 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 CCDC85BQ15834 202 aaPredicted RBP8.09□□□□□ -1.11
CNOT8-220ENST00000522139 ZNF385CQ66K41 422 aaPredicted RBP8.09□□□□□ -1.11
CNOT8-220ENST00000522139 ADAMTSL4Q6UY14 1074 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 TPTE2Q6XPS3 522 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 ERMP1Q7Z2K6 904 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 USP48Q86UV5 1035 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 NOC4LQ9BVI4 516 aaKnown RBP8.09□□□□□ -1.11
CNOT8-220ENST00000522139 MUC3BQ9H195 1237 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 ACBD3Q9H3P7 528 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
CNOT8-220ENST00000522139 DDX41Q9UJV9 622 aaKnown RBP8.09□□□□□ -1.11
CNOT8-220ENST00000522139 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.09□□□□□ -1.11
CNOT8-220ENST00000522139 RACK1P63244 317 aaKnown RBP8.08□□□□□ -1.12
CNOT8-220ENST00000522139 LPIN3Q9BQK8 851 aa8.08□□□□□ -1.12
CNOT8-220ENST00000522139 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
CNOT8-220ENST00000522139 ZFYVE1Q9HBF4 777 aa8.08□□□□□ -1.12
CNOT8-220ENST00000522139 SRA1Q9HD15 236 aaKnown RBP8.08□□□□□ -1.12
CNOT8-220ENST00000522139 TRIM33Q9UPN9 1127 aa8.08□□□□□ -1.12
CNOT8-220ENST00000522139 ELOA3CA0A087WX78 387 aaPredicted RBP8.07□□□□□ -1.12
CNOT8-220ENST00000522139 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
CNOT8-220ENST00000522139 F6X3S4 739 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 ZNF654Q8IZM8 581 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 ELOA3Q8NG57 546 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 LACRTQ9GZZ8 138 aa8.07□□□□□ -1.12
CNOT8-220ENST00000522139 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms