RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 HHIPQ96QV1 700 aa8.81□□□□□ -1
SKP1-208ENST00000521216 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
SKP1-208ENST00000521216 LILRB5O75023 590 aa8.8□□□□□ -1
SKP1-208ENST00000521216 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
SKP1-208ENST00000521216 FBF1Q8TES7 1133 aa8.8□□□□□ -1
SKP1-208ENST00000521216 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
SKP1-208ENST00000521216 LIN7BQ9HAP6 207 aa8.8□□□□□ -1
SKP1-208ENST00000521216 RNF19AQ9NV58 838 aa8.8□□□□□ -1
SKP1-208ENST00000521216 FRRS1LQ9P0K9 344 aa8.8□□□□□ -1
SKP1-208ENST00000521216 TRIM33Q9UPN9 1127 aa8.8□□□□□ -1
SKP1-208ENST00000521216 C20orf204Q6ZNR8 217 aa8.79□□□□□ -1
SKP1-208ENST00000521216 FAM161BQ96MY7 647 aa8.79□□□□□ -1
SKP1-208ENST00000521216 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
SKP1-208ENST00000521216 PARP2Q9UGN5 583 aa8.79□□□□□ -1
SKP1-208ENST00000521216 SPG7Q9UQ90 795 aa8.79□□□□□ -1
SKP1-208ENST00000521216 FAM177BA6PVY3 158 aa8.78□□□□□ -1
SKP1-208ENST00000521216 ARHGEF15O94989 841 aa8.78□□□□□ -1
SKP1-208ENST00000521216 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
SKP1-208ENST00000521216 KIAA0319Q5VV43 1072 aa8.78□□□□□ -1
SKP1-208ENST00000521216 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
SKP1-208ENST00000521216 PPP4R2Q9NY27 417 aa8.78□□□□□ -1
SKP1-208ENST00000521216 METTL12A8MUP2 240 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 NFKBIEO00221 500 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 CDC25BP30305 580 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 AFF1P51825 1210 aaKnown RBP8.77□□□□□ -1.01
SKP1-208ENST00000521216 PSMD2Q13200 908 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 GRM2Q14416 872 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 NXPE4Q6UWF7 544 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 BCO2Q9BYV7 579 aa8.77□□□□□ -1.01
SKP1-208ENST00000521216 PTPRAP18433 802 aa8.76□□□□□ -1.01
SKP1-208ENST00000521216 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
SKP1-208ENST00000521216 SNRPNP63162 240 aaKnown RBP8.76□□□□□ -1.01
SKP1-208ENST00000521216 IL22RA1Q8N6P7 574 aa8.76□□□□□ -1.01
SKP1-208ENST00000521216 TMEM102Q8N9M5 508 aaPredicted RBP8.76□□□□□ -1.01
SKP1-208ENST00000521216 BCL11AQ9H165 835 aa8.76□□□□□ -1.01
SKP1-208ENST00000521216 MRS2Q9HD23 443 aa8.76□□□□□ -1.01
SKP1-208ENST00000521216 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
SKP1-208ENST00000521216 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
SKP1-208ENST00000521216 GNA15P30679 374 aa8.75□□□□□ -1.01
SKP1-208ENST00000521216 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
SKP1-208ENST00000521216 TTC9Q92623 222 aa8.75□□□□□ -1.01
SKP1-208ENST00000521216 TCF12Q99081 682 aa8.75□□□□□ -1.01
SKP1-208ENST00000521216 SH2B1Q9NRF2 756 aaPredicted RBP8.75□□□□□ -1.01
SKP1-208ENST00000521216 EIF4BP23588 611 aaKnown RBP8.74□□□□□ -1.01
SKP1-208ENST00000521216 FCGRTP55899 365 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 SPRED3Q2MJR0 410 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 WFDC8Q8IUA0 241 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 OSBPL7Q9BZF2 842 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 ADAMTS8Q9UP79 889 aa8.74□□□□□ -1.01
SKP1-208ENST00000521216 CDC27P30260 824 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 GRIA4P48058 902 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 DGKGP49619 791 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 RBM25P49756 843 aaKnown RBP8.73□□□□□ -1.01
SKP1-208ENST00000521216 GRIK5Q16478 980 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 TRAPPC3LQ5T215 181 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 ADAMTSL4Q6UY14 1074 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 DTHD1Q6ZMT9 781 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 DMRTC2Q8IXT2 367 aaPredicted RBP8.73□□□□□ -1.01
SKP1-208ENST00000521216 FRMD6Q96NE9 622 aa8.73□□□□□ -1.01
SKP1-208ENST00000521216 BHLHE41Q9C0J9 482 aaPredicted RBP8.73□□□□□ -1.01
SKP1-208ENST00000521216 A0A096LPE4 126 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 A0A1W2PPZ6 126 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 GIPC1O14908 333 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 DAB2P98082 770 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 MSL1Q68DK7 614 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 BSNDQ8WZ55 320 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 C12orf49Q9H741 205 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 VTI1BQ9UEU0 232 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 AKAP2Q9Y2D5 859 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 AK5Q9Y6K8 562 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 CNTNAP5Q8WYK1 1306 aa8.72□□□□□ -1.01
SKP1-208ENST00000521216 SORBS3O60504 671 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.02
SKP1-208ENST00000521216 CABP4P57796 275 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 TXNDC11Q6PKC3 985 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 TMC4Q7Z404 712 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.02
SKP1-208ENST00000521216 GLIS3Q8NEA6 775 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 MUC3BQ9H195 1237 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 ABCB6Q9NP58 842 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
SKP1-208ENST00000521216 LINC01387J3KSC0 135 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 USP17L7P0C7H9 530 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 NID1P14543 1247 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 EPHA1P21709 976 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 PRPF40BQ6NWY9 871 aaKnown RBP8.7□□□□□ -1.02
SKP1-208ENST00000521216 CACTIN-AS1Q8N1I8 211 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 PLVAPQ9BX97 442 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 ADAM19Q9H013 955 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 FAM8A1Q9UBU6 413 aa8.7□□□□□ -1.02
SKP1-208ENST00000521216 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 GNB5O14775 395 aa8.69□□□□□ -1.02
SKP1-208ENST00000521216 GSTT1P30711 240 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms