RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 CCDC83Q8IWF9 413 aa18.16■□□□□ 0.5
SDHA-218ENST00000515752 MYH14Q7Z406 1995 aaKnown RBP18.15■□□□□ 0.5
SDHA-218ENST00000515752 MBD3O95983 291 aa18.15■□□□□ 0.5
SDHA-218ENST00000515752 ZSCAN22P10073 491 aaPredicted RBP18.15■□□□□ 0.5
SDHA-218ENST00000515752 MCAMP43121 646 aa18.15■□□□□ 0.5
SDHA-218ENST00000515752 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
SDHA-218ENST00000515752 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
SDHA-218ENST00000515752 OSBP2Q969R2 916 aa18.15■□□□□ 0.5
SDHA-218ENST00000515752 GJD4Q96KN9 370 aaPredicted RBP18.15■□□□□ 0.5
SDHA-218ENST00000515752 NYXQ9GZU5 481 aa18.15■□□□□ 0.5
SDHA-218ENST00000515752 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
SDHA-218ENST00000515752 SYT1P21579 422 aa18.14■□□□□ 0.5
SDHA-218ENST00000515752 SCARF1Q14162 830 aa18.14■□□□□ 0.5
SDHA-218ENST00000515752 UBE3CQ15386 1083 aa18.14■□□□□ 0.5
SDHA-218ENST00000515752 SF3B3Q15393 1217 aaKnown RBP18.14■□□□□ 0.5
SDHA-218ENST00000515752 FAM177BA6PVY3 158 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
SDHA-218ENST00000515752 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
SDHA-218ENST00000515752 LARGE1O95461 756 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 CHGBP05060 677 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 GJB2P29033 226 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 MRE11P49959 708 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 TOB2Q14106 344 aaPredicted RBP18.14■□□□□ 0.49
SDHA-218ENST00000515752 CERKQ8TCT0 537 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 NARFQ9UHQ1 456 aa18.14■□□□□ 0.49
SDHA-218ENST00000515752 IMMTQ16891 758 aaKnown RBP18.13■□□□□ 0.49
SDHA-218ENST00000515752 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
SDHA-218ENST00000515752 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
SDHA-218ENST00000515752 BCORQ6W2J9 1755 aa18.13■□□□□ 0.49
SDHA-218ENST00000515752 M0R2C6 588 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 ADD2P35612 726 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 FGD1P98174 961 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 LAMB2P55268 1798 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 NCLP19338 710 aaKnown RBP18.12■□□□□ 0.49
SDHA-218ENST00000515752 CSPP1Q1MSJ5 1256 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 FBXL16Q8N461 479 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 SEC31BQ9NQW1 1179 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
SDHA-218ENST00000515752 RTCBQ9Y3I0 505 aaKnown RBP18.12■□□□□ 0.49
SDHA-218ENST00000515752 ATRNO75882 1429 aa18.12■□□□□ 0.49
SDHA-218ENST00000515752 ZPR1O75312 459 aa18.11■□□□□ 0.49
SDHA-218ENST00000515752 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
SDHA-218ENST00000515752 PHKA1P46020 1223 aa18.11■□□□□ 0.49
SDHA-218ENST00000515752 SLC9C2Q5TAH2 1124 aa18.11■□□□□ 0.49
SDHA-218ENST00000515752 FOXD4L5Q5VV16 416 aaPredicted RBP18.11■□□□□ 0.49
SDHA-218ENST00000515752 FOXD4L4Q8WXT5 416 aaPredicted RBP18.11■□□□□ 0.49
SDHA-218ENST00000515752 TRPC5Q9UL62 973 aaPredicted RBP18.11■□□□□ 0.49
SDHA-218ENST00000515752 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
SDHA-218ENST00000515752 E7EWF7 191 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 F13A1P00488 732 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 Q6ZUG5 572 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 ANKRD18AQ8IVF6 992 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 SPATA5Q8NB90 893 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 SETDB2Q96T68 719 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 AGXT2Q9BYV1 514 aa18.1■□□□□ 0.49
SDHA-218ENST00000515752 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 MAP3K12Q12852 859 aa18.09■□□□□ 0.49
SDHA-218ENST00000515752 NECAB1Q8N987 351 aa18.09■□□□□ 0.49
SDHA-218ENST00000515752 TMEM87AQ8NBN3 555 aa18.09■□□□□ 0.49
SDHA-218ENST00000515752 LLPHQ9BRT6 129 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 GPAA1O43292 621 aa18.09■□□□□ 0.49
SDHA-218ENST00000515752 LARP1BQ659C4 914 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
SDHA-218ENST00000515752 PUS7LQ9H0K6 701 aaKnown RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 BSDC1Q9NW68 430 aaPredicted RBP18.09■□□□□ 0.49
SDHA-218ENST00000515752 ARAP2Q8WZ64 1704 aa18.08■□□□□ 0.49
SDHA-218ENST00000515752 GNPATO15228 680 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 IDH1O75874 414 aaKnown RBP18.08■□□□□ 0.48
SDHA-218ENST00000515752 CHRNDQ07001 517 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 ST3GAL1Q11201 340 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 SLFNL1Q499Z3 407 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 ERFEQ4G0M1 354 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 PI16Q6UXB8 463 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 STOX1Q6ZVD7 989 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.48
SDHA-218ENST00000515752 TCEANC2Q96MN5 208 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 KIF3AQ9Y496 699 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 AFF2P51816 1311 aa18.08■□□□□ 0.48
SDHA-218ENST00000515752 FGAP02671 866 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 ZNF445P59923 1031 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 UBE4AQ14139 1066 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 TPTE2Q6XPS3 522 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 GNL3LQ9NVN8 582 aaKnown RBP18.07■□□□□ 0.48
SDHA-218ENST00000515752 MTMR6Q9Y217 621 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 WDR19Q8NEZ3 1342 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 SCN7AQ01118 1682 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 ZNF213O14771 459 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 PDE6AP16499 860 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 BRF1Q92994 677 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
SDHA-218ENST00000515752 PIH1D3Q9NQM4 214 aaKnown RBP18.07■□□□□ 0.48
SDHA-218ENST00000515752 BTAF1O14981 1849 aa18.06■□□□□ 0.48
SDHA-218ENST00000515752 AKAP11Q9UKA4 1901 aa18.06■□□□□ 0.48
SDHA-218ENST00000515752 PFKFB2O60825 505 aa18.06■□□□□ 0.48
SDHA-218ENST00000515752 TBC1D9BQ66K14 1250 aa18.06■□□□□ 0.48
SDHA-218ENST00000515752 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms