RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZNHIT6Q9NWK9 470 aaKnown RBP15.08■□□□□ 0
TCOF1-213ENST00000514442 CFAP74Q9C0B2 1584 aa15.08■□□□□ 0
TCOF1-213ENST00000514442 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
TCOF1-213ENST00000514442 PREX2Q70Z35 1606 aa15.08■□□□□ 0
TCOF1-213ENST00000514442 PLXNC1O60486 1568 aa15.08■□□□□ 0
TCOF1-213ENST00000514442 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0
TCOF1-213ENST00000514442 CHST3Q7LGC8 479 aa15.08■□□□□ 0
TCOF1-213ENST00000514442 DNAJC25Q9H1X3 360 aa15.08■□□□□ 0
TCOF1-213ENST00000514442 CLGNO14967 610 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
TCOF1-213ENST00000514442 DNM1Q05193 864 aaKnown RBP15.07■□□□□ 0
TCOF1-213ENST00000514442 TSPOAP1O95153 1857 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 TOP1P11387 765 aaKnown RBP15.07■□□□□ 0
TCOF1-213ENST00000514442 Q6ZUG5 572 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 SLF2Q8IX21 1173 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 DRC1Q96MC2 740 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 MYCBPQ99417 103 aaPredicted RBP15.07■□□□□ 0
TCOF1-213ENST00000514442 BIN1O00499 593 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 A1BGP04217 495 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 MCM3P25205 808 aa15.07■□□□□ 0
TCOF1-213ENST00000514442 TTC41PQ6P2S7 1318 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 BAG3O95817 575 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 CERS3Q8IU89 383 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 DACT1Q9NYF0 836 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 JAG2Q9Y219 1238 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 KIF5CO60282 957 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 LDHCP07864 332 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 SYT10Q6XYQ8 523 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 ERVK-7P63135 1459 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 CCDC194A0A1B0GVG4 234 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
TCOF1-213ENST00000514442 PDE4BQ07343 736 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 SLC52A2Q9HAB3 445 aa15.06■□□□□ 0
TCOF1-213ENST00000514442 CHMLP26374 656 aa15.05■□□□□ 0
TCOF1-213ENST00000514442 CRNKL1Q9BZJ0 848 aaKnown RBP15.05■□□□□ 0
TCOF1-213ENST00000514442 VPS18Q9P253 973 aa15.05■□□□□ 0
TCOF1-213ENST00000514442 BRD1O95696 1058 aa15.05■□□□□ 0
TCOF1-213ENST00000514442 MIGA1Q8NAN2 632 aa15.05■□□□□ 0
TCOF1-213ENST00000514442 KAT14Q9H8E8 782 aa15.05■□□□□ 0
TCOF1-213ENST00000514442 KCNQ3O43525 872 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
TCOF1-213ENST00000514442 PKP1Q13835 747 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 EFCC1Q9HA90 598 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 PYCARDQ9ULZ3 195 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 STX8Q9UNK0 236 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 ZNF521Q96K83 1311 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 ZNF75DP51815 510 aa15.05■□□□□ -0
TCOF1-213ENST00000514442 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ -0
TCOF1-213ENST00000514442 KDM5CP41229 1560 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 PNMA6EA0A0J9YXQ4 647 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 GNG11P61952 73 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 TIMM10P62072 90 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 MICALCLQ6ZW33 695 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 WTAPQ15007 396 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 KIF4BQ2VIQ3 1234 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 CPA1P15085 419 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 TERF2Q15554 542 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 ZSCAN26Q16670 478 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 ISM2Q6H9L7 571 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 NAA16Q6N069 864 aaPredicted RBP15.04■□□□□ -0
TCOF1-213ENST00000514442 CNNM3Q8NE01 707 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 ZNF594Q96JF6 807 aaPredicted RBP15.04■□□□□ -0
TCOF1-213ENST00000514442 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
TCOF1-213ENST00000514442 RTCBQ9Y3I0 505 aaKnown RBP15.04■□□□□ -0
TCOF1-213ENST00000514442 IQCEQ6IPM2 695 aa15.04■□□□□ -0
TCOF1-213ENST00000514442 MCM6Q14566 821 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 ZNF496Q96IT1 587 aaPredicted RBP15.03■□□□□ -0
TCOF1-213ENST00000514442 SLAIN2Q9P270 581 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 PLBD2Q8NHP8 589 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 PPM1EQ8WY54 764 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 ARHGEF10O15013 1369 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 RNF113AO15541 343 aaKnown RBP15.03■□□□□ -0
TCOF1-213ENST00000514442 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
TCOF1-213ENST00000514442 NF2P35240 595 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 NBPF11Q86T75 865 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 EFCAB6Q5THR3 1501 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 AK2P54819 239 aa15.03■□□□□ -0
TCOF1-213ENST00000514442 IRX5P78411 483 aaPredicted RBP15.03■□□□□ -0
TCOF1-213ENST00000514442 KDM5DQ9BY66 1539 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 GNPATO15228 680 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 ZBTB43O43298 467 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
TCOF1-213ENST00000514442 CREB3L3Q68CJ9 461 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 MAGEB6Q8N7X4 407 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 GOLGA1Q92805 767 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 KIAA1524Q8TCG1 905 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 SUCLG2Q96I99 432 aa15.02■□□□□ -0
TCOF1-213ENST00000514442 EIF4A1P60842 406 aaKnown RBP15.02□□□□□ -0.01
TCOF1-213ENST00000514442 PICALMQ13492 652 aa15.02□□□□□ -0.01
TCOF1-213ENST00000514442 CCDC129Q6ZRS4 1044 aa15.02□□□□□ -0.01
TCOF1-213ENST00000514442 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
TCOF1-213ENST00000514442 OAS2P29728 719 aaKnown RBP15.01□□□□□ -0.01
TCOF1-213ENST00000514442 TPTE2Q6XPS3 522 aa15.01□□□□□ -0.01
TCOF1-213ENST00000514442 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
TCOF1-213ENST00000514442 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms