RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.782e-9■■□□□ 14.2
RFC1-213ENST00000512275 PRICKLE2Q7Z3G6 844 aa10.15□□□□□ -0.78
RFC1-213ENST00000512275 FBF1Q8TES7 1133 aa10.15□□□□□ -0.78
RFC1-213ENST00000512275 PIK3R5Q8WYR1 880 aa10.15□□□□□ -0.78
RFC1-213ENST00000512275 ZIC5Q96T25 663 aa10.15□□□□□ -0.78
RFC1-213ENST00000512275 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.78
RFC1-213ENST00000512275 ERBINQ96RT1 1412 aa10.15□□□□□ -0.79
RFC1-213ENST00000512275 DEPDC5O75140 1603 aa10.15□□□□□ -0.79
RFC1-213ENST00000512275 ARHGEF40Q8TER5 1519 aa10.14□□□□□ -0.79
RFC1-213ENST00000512275 A0A1B0GTH6 734 aa10.14□□□□□ -0.79
RFC1-213ENST00000512275 A6NHS1 94 aa10.14□□□□□ -0.79
RFC1-213ENST00000512275 BTLAQ7Z6A9 289 aa10.14□□□□□ -0.79
RFC1-213ENST00000512275 YEATS2Q9ULM3 1422 aa10.14□□□□□ -0.79
RFC1-213ENST00000512275 A2MP01023 1474 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 FIGNL2A6NMB9 653 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 EIF1AYO14602 144 aaKnown RBP10.13□□□□□ -0.79
RFC1-213ENST00000512275 MSX1P28360 303 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 ARSDP51689 593 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 TRIP4Q15650 581 aaPredicted RBP10.13□□□□□ -0.79
RFC1-213ENST00000512275 XKR5Q6UX68 686 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 DNAJC25Q9H1X3 360 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 CEP152O94986 1710 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 SIGLEC1Q9BZZ2 1709 aa10.13□□□□□ -0.79
RFC1-213ENST00000512275 KDM5DQ9BY66 1539 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 IQGAP3Q86VI3 1631 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 SCAMP3O14828 347 aaKnown RBP10.12□□□□□ -0.79
RFC1-213ENST00000512275 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
RFC1-213ENST00000512275 GNA15P30679 374 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 PTSQ03393 145 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 BICDL1Q6ZP65 573 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 TIMMDC1Q9NPL8 285 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 BCORL1Q5H9F3 1711 aa10.12□□□□□ -0.79
RFC1-213ENST00000512275 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
RFC1-213ENST00000512275 PZPP20742 1482 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 SORBS3O60504 671 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 RHOQP17081 205 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 TYRO3Q06418 890 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 PSMD2Q13200 908 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 CRISPLD1Q9H336 500 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 RTCBQ9Y3I0 505 aaKnown RBP10.11□□□□□ -0.79
RFC1-213ENST00000512275 KCNMB2Q9Y691 235 aa10.11□□□□□ -0.79
RFC1-213ENST00000512275 MAGI2Q86UL8 1455 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 NEFLP07196 543 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 HDLBPQ00341 1268 aaKnown RBP10.1□□□□□ -0.79
RFC1-213ENST00000512275 LRRC69Q6ZNQ3 347 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 MRS2Q9HD23 443 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
RFC1-213ENST00000512275 DHX29Q7Z478 1369 aaKnown RBP10.1□□□□□ -0.79
RFC1-213ENST00000512275 PRDM15P57071 1507 aaPredicted RBP10.09□□□□□ -0.79
RFC1-213ENST00000512275 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
RFC1-213ENST00000512275 TNFRSF21O75509 655 aa10.09□□□□□ -0.79
RFC1-213ENST00000512275 ARSJQ5FYB0 599 aaPredicted RBP10.09□□□□□ -0.79
RFC1-213ENST00000512275 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
RFC1-213ENST00000512275 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
RFC1-213ENST00000512275 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
RFC1-213ENST00000512275 CPNE3O75131 537 aaKnown RBP10.08□□□□□ -0.8
RFC1-213ENST00000512275 FRMD6Q96NE9 622 aa10.08□□□□□ -0.8
RFC1-213ENST00000512275 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
RFC1-213ENST00000512275 NUP155O75694 1391 aa10.08□□□□□ -0.8
RFC1-213ENST00000512275 E9PCH4 1651 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 TET3O43151 1660 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 ATP10AO60312 1499 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 KIF3BO15066 747 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 METTL16Q86W50 562 aaKnown RBP10.07□□□□□ -0.8
RFC1-213ENST00000512275 GPR161Q8N6U8 529 aaKnown RBP10.07□□□□□ -0.8
RFC1-213ENST00000512275 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 VTI1BQ9UEU0 232 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 FNDC3AQ9Y2H6 1198 aaKnown RBP10.07□□□□□ -0.8
RFC1-213ENST00000512275 DYRK1BQ9Y463 629 aa10.07□□□□□ -0.8
RFC1-213ENST00000512275 VWDEQ8N2E2 1590 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 FANCCQ00597 558 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 MPHOSPH9Q99550 1183 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 METTL5Q9NRN9 209 aaKnown RBP10.06□□□□□ -0.8
RFC1-213ENST00000512275 AK5Q9Y6K8 562 aa10.06□□□□□ -0.8
RFC1-213ENST00000512275 CAMSAP1Q5T5Y3 1602 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 EGFRP00533 1210 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
RFC1-213ENST00000512275 KRT76Q01546 638 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 USPL1Q5W0Q7 1092 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 ZNF438Q7Z4V0 828 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
RFC1-213ENST00000512275 TMEM87AQ8NBN3 555 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 ELP3Q9H9T3 547 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 C11orf16Q9NQ32 467 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 TMEM63CQ9P1W3 806 aa10.05□□□□□ -0.8
RFC1-213ENST00000512275 ZC3H13Q5T200 1668 aaKnown RBP10.05□□□□□ -0.8
RFC1-213ENST00000512275 CFAP65Q6ZU64 1925 aaKnown RBP10.04□□□□□ -0.8
RFC1-213ENST00000512275 SLC35F4A4IF30 521 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 F11P03951 625 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 CTSHP09668 335 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 EPB42P16452 691 aa10.04□□□□□ -0.8
RFC1-213ENST00000512275 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms