RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GJA3Q9Y6H8 435 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 AFF2P51816 1311 aa6.04□□□□□ -1.44
TRAPPC11-208ENST00000511955 MED1Q15648 1581 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 FAM83GA6ND36 823 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 ENPP3O14638 875 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 FYB1O15117 783 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 PPFIA3O75145 1194 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 RGS20O76081 388 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 MTA2O94776 668 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 NAT2P11245 290 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 PDE4AP27815 886 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 CDC27P30260 824 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 HMGN5P82970 282 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 RRS1Q15050 365 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 PPP2R5AQ15172 486 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 E2F5Q15329 346 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 MSL1Q68DK7 614 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 COG3Q96JB2 828 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 PTPRHQ9HD43 1115 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 BTG4Q9NY30 223 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 MYOM1P52179 1685 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 TRPM3Q9HCF6 1732 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 EDC4Q6P2E9 1401 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 A0A0G2JS52 829 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 K7ELQ4 463 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 NDUFV2P19404 249 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 FANCCQ00597 558 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 VPS72Q15906 364 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 EAPPQ56P03 285 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 KRT77Q7Z794 578 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 KIAA1958Q8N8K9 716 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 MYRIPQ8NFW9 859 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 LTV1Q96GA3 475 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 FRMD6Q96NE9 622 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 GMLQ99445 158 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 ARNT2Q9HBZ2 717 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 USP21Q9UK80 565 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 MRPS23Q9Y3D9 190 aaKnown RBP6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 RABGAP1Q9Y3P9 1069 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 NINLQ9Y2I6 1382 aa6.03□□□□□ -1.44
TRAPPC11-208ENST00000511955 PIK3C2AO00443 1686 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 SHPRHQ149N8 1683 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ERICH4A6NGS2 130 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 CAND2O75155 1236 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 NAP1L1P55209 391 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 WASHC5Q12768 1159 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 INO80DQ53TQ3 878 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 NYAP1Q6ZVC0 841 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 CFAP53Q96M91 514 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 IP6K2Q9UHH9 426 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 POLG2Q9UHN1 485 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 CGNL1Q0VF96 1302 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 TTC21AQ8NDW8 1320 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 SSH2Q76I76 1423 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 CLK1P49759 484 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZBED6P86452 979 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ARID5AQ03989 594 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 HIC1Q14526 733 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 SEPT2Q15019 361 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 LRRC41Q15345 812 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 RELL1Q8IUW5 271 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 NGEFQ8N5V2 710 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZNF579Q8NAF0 562 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ATRIPQ8WXE1 791 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 PAIP2Q9BPZ3 127 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 RGS17Q9UGC6 210 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 NOVA2Q9UNW9 492 aaKnown RBP6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 ALS2Q96Q42 1657 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 AKAP12Q02952 1782 aa6.02□□□□□ -1.45
TRAPPC11-208ENST00000511955 MON2Q7Z3U7 1717 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 GRXCR2A6NFK2 248 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 GOLGA6L6A8MZA4 724 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 H3BRB1 525 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 ABL1P00519 1130 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 KCNA2P16389 499 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 GJC2Q5T442 439 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 TAF3Q5VWG9 929 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 POTEAQ6S8J7 498 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 TBC1D9Q6ZT07 1266 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 UBE2Q1Q7Z7E8 422 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 MORC1Q86VD1 984 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 LMNTD2Q8IXW0 634 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 NDUFAF2Q8N183 169 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 OGFOD1Q8N543 542 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 TEX19Q8NA77 164 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 RNF217Q8TC41 542 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 TUT1Q9H6E5 874 aaKnown RBP6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 CD248Q9HCU0 757 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 TYW1Q9NV66 732 aaKnown RBP6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 CLIC5Q9NZA1 410 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 PCDHB8Q9UN66 801 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 AXIN2Q9Y2T1 843 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 PCDHB13Q9Y5F0 798 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 NRKQ7Z2Y5 1582 aa6.01□□□□□ -1.45
TRAPPC11-208ENST00000511955 CCDC163A0A0D9SF12 145 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 U2AF1L5P0DN76 240 aaPredicted RBP6□□□□□ -1.45
TRAPPC11-208ENST00000511955 CASQ1P31415 396 aa6□□□□□ -1.45
TRAPPC11-208ENST00000511955 U2AF1Q01081 240 aaKnown RBP eCLIP6□□□□□ -1.45
TRAPPC11-208ENST00000511955 ZNF211Q13398 564 aaPredicted RBP6□□□□□ -1.45
TRAPPC11-208ENST00000511955 LMBRD2Q68DH5 695 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms