RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 MAP4K1Q92918 833 aa15.33■□□□□ 0.05
SPCS3-201ENST00000503362 PLEKHG1Q9ULL1 1385 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 ERICH4A6NGS2 130 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 EYA2O00167 538 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
SPCS3-201ENST00000503362 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 BICDL1Q6ZP65 573 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 UBASH3AP57075 661 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 C19orf44Q9H6X5 657 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 HELLSQ9NRZ9 838 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 RIOK3O14730 519 aaKnown RBP15.33■□□□□ 0.04
SPCS3-201ENST00000503362 POLA2Q14181 598 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 CAGE1Q8TC20 777 aa15.33■□□□□ 0.04
SPCS3-201ENST00000503362 MAGEC2Q9UBF1 373 aaPredicted RBP15.33■□□□□ 0.04
SPCS3-201ENST00000503362 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 KIDINS220Q9ULH0 1771 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 A1BGP04217 495 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 ARHGAP29Q52LW3 1261 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
SPCS3-201ENST00000503362 ZNF75DP51815 510 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
SPCS3-201ENST00000503362 NR1I2O75469 434 aa15.31■□□□□ 0.04
SPCS3-201ENST00000503362 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-201ENST00000503362 FAM89AQ96GI7 184 aa15.31■□□□□ 0.04
SPCS3-201ENST00000503362 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-201ENST00000503362 ACBD3Q9H3P7 528 aa15.31■□□□□ 0.04
SPCS3-201ENST00000503362 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
SPCS3-201ENST00000503362 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
SPCS3-201ENST00000503362 CYP2E1P05181 493 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-201ENST00000503362 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-201ENST00000503362 RNF41Q9H4P4 317 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-201ENST00000503362 DNAI1Q9UI46 699 aa15.3■□□□□ 0.04
SPCS3-201ENST00000503362 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
SPCS3-201ENST00000503362 CAMSAP1Q5T5Y3 1602 aa15.3■□□□□ 0.04
SPCS3-201ENST00000503362 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
SPCS3-201ENST00000503362 NLRP1Q9C000 1473 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
SPCS3-201ENST00000503362 TAF5LO75529 589 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 DDIT3P35638 169 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 LRMPQ12912 555 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 DBNLQ9UJU6 430 aaKnown RBP15.29■□□□□ 0.04
SPCS3-201ENST00000503362 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 STIM1Q13586 685 aa15.29■□□□□ 0.04
SPCS3-201ENST00000503362 IGSF3O75054 1194 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 CASQ1P31415 396 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 ZNHIT6Q9NWK9 470 aaKnown RBP15.28■□□□□ 0.04
SPCS3-201ENST00000503362 UQCRFS1P1P0C7P4 283 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 ATL3Q6DD88 541 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 ATP10DQ9P241 1426 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 SASH1O94885 1247 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 GNG11P61952 73 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 WTAPQ15007 396 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 BRAPQ7Z569 592 aa15.28■□□□□ 0.04
SPCS3-201ENST00000503362 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
SPCS3-201ENST00000503362 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
SPCS3-201ENST00000503362 ZC3H13Q5T200 1668 aaKnown RBP15.27■□□□□ 0.04
SPCS3-201ENST00000503362 E7EWF7 191 aa15.27■□□□□ 0.04
SPCS3-201ENST00000503362 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.03
SPCS3-201ENST00000503362 XAGE2Q96GT9 111 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 USP28Q96RU2 1077 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 NECTIN1Q15223 517 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 KIF4BQ2VIQ3 1234 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 CAVIN4Q5BKX8 364 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 MROH2AA6NES4 1674 aa15.27■□□□□ 0.03
SPCS3-201ENST00000503362 SETD1BQ9UPS6 1966 aaKnown RBP15.26■□□□□ 0.03
SPCS3-201ENST00000503362 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 SLU7O95391 586 aaKnown RBP15.26■□□□□ 0.03
SPCS3-201ENST00000503362 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 PYCARDQ9ULZ3 195 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 POLR3GO15318 223 aaPredicted RBP15.26■□□□□ 0.03
SPCS3-201ENST00000503362 RTN1Q16799 776 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 ARHGEF25Q86VW2 580 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 IL2RBP14784 551 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 AFMP43652 599 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 PDE4CQ08493 712 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 CATIPQ7Z7H3 387 aa15.26■□□□□ 0.03
SPCS3-201ENST00000503362 CRB1P82279 1406 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 GPAA1O43292 621 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 KIF5CO60282 957 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 ERLIN1O75477 346 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 CYP21A2P08686 494 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 PHKG2P15735 406 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 SYT10Q6XYQ8 523 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 PDLIM2Q96JY6 352 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 CPS1P31327 1500 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 B4E1Z4 1266 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
SPCS3-201ENST00000503362 NUTM2BA6NNL0 878 aaPredicted RBP15.25■□□□□ 0.03
SPCS3-201ENST00000503362 NUTM2EB1AL46 878 aaPredicted RBP15.25■□□□□ 0.03
SPCS3-201ENST00000503362 EXOC5O00471 708 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms