RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 ABCC6O95255 1503 aa15.03■□□□□ -0
VEGFA-215ENST00000497139 ADD1P35611 737 aaKnown RBP15.02■□□□□ -0
VEGFA-215ENST00000497139 GNL2Q13823 731 aaKnown RBP15.02■□□□□ -0
VEGFA-215ENST00000497139 FAM71BQ8TC56 605 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 ACBD3Q9H3P7 528 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 VPS18Q9P253 973 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 TSPYL4Q9UJ04 414 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 ALKQ9UM73 1620 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 JCADQ9P266 1359 aa15.02■□□□□ -0
VEGFA-215ENST00000497139 A0A087WUV0 522 aaPredicted RBP15.02□□□□□ -0.01
VEGFA-215ENST00000497139 EIF5P55010 431 aaKnown RBP15.02□□□□□ -0.01
VEGFA-215ENST00000497139 KRT32Q14532 448 aa15.02□□□□□ -0.01
VEGFA-215ENST00000497139 UTP14AQ9BVJ6 771 aaKnown RBP15.02□□□□□ -0.01
VEGFA-215ENST00000497139 RAB21Q9UL25 225 aa15.02□□□□□ -0.01
VEGFA-215ENST00000497139 A0A1W2PQ27 194 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 A0A1W2PQ64 194 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 A0A1W2PQD8 194 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 VWA3AA6NCI4 1184 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 FANCGO15287 622 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 DONSONQ9NYP3 566 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 PPFIA4O75335 1185 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 TACO1Q9BSH4 297 aaKnown RBP15.01□□□□□ -0.01
VEGFA-215ENST00000497139 GBP3Q9H0R5 595 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 MED4Q9NPJ6 270 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 KIAA1468Q9P260 1216 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-215ENST00000497139 USP8P40818 1118 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 FMR1NBQ8N0W7 255 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-215ENST00000497139 FSIP1Q8NA03 581 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 MRPS27Q92552 414 aaKnown RBP15.01□□□□□ -0.01
VEGFA-215ENST00000497139 SYTL4Q96C24 671 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-215ENST00000497139 CHMP4CQ96CF2 233 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 ECHDC1Q9NTX5 307 aa15.01□□□□□ -0.01
VEGFA-215ENST00000497139 C3P01024 1663 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 LRRC37A3O60309 1634 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 CCDC196A0A1B0GTZ2 297 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
VEGFA-215ENST00000497139 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 TADA2BQ86TJ2 420 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 MSANTD4Q8NCY6 345 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 PPP2R2CQ9Y2T4 447 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 NLRP12P59046 1061 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 SMARCC2Q8TAQ2 1214 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 PDE11AQ9HCR9 933 aa15□□□□□ -0.01
VEGFA-215ENST00000497139 FANCCQ00597 558 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 HSP90B2PQ58FF3 399 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 FBXO31Q5XUX0 539 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-215ENST00000497139 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 CXorf56Q9H5V9 222 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 TOMM22Q9NS69 142 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 DNAJC21Q5F1R6 531 aaKnown RBP14.99□□□□□ -0.01
VEGFA-215ENST00000497139 KIFC2Q96AC6 838 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 SDF4Q9BRK5 362 aa14.99□□□□□ -0.01
VEGFA-215ENST00000497139 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
VEGFA-215ENST00000497139 NCAPHQ15003 741 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 ADALQ6DHV7 355 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 SRGAP1Q7Z6B7 1085 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 NME9Q86XW9 330 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 CEP112Q8N8E3 955 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 DTNBO60941 627 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 GNG11P61952 73 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 EIF4A2Q14240 407 aaKnown RBP14.98□□□□□ -0.01
VEGFA-215ENST00000497139 LRRC31Q6UY01 552 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 CLASRPQ8N2M8 674 aaKnown RBP14.98□□□□□ -0.01
VEGFA-215ENST00000497139 L1RE1Q9UN81 338 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
VEGFA-215ENST00000497139 AKAP12Q02952 1782 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 STX10O60499 249 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 MLECQ14165 292 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 DPCR1Q3MIW9 517 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 CHMP4BP1P59074 171 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 CT47A1Q5JQC4 288 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-215ENST00000497139 VSTM4Q8IW00 320 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 GPATCH11Q8N954 259 aa14.97□□□□□ -0.01
VEGFA-215ENST00000497139 MED23Q9ULK4 1368 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
VEGFA-215ENST00000497139 TMEM139Q8IV31 216 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 BANK1Q8NDB2 785 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 ANKRD20A12PQ8NF67 263 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 EPC1Q9H2F5 836 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 JAK2O60674 1132 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 ME1P48163 572 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 BABAM1Q9NWV8 329 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 FAN1Q9Y2M0 1017 aa14.96□□□□□ -0.01
VEGFA-215ENST00000497139 MAP2K2P36507 400 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
VEGFA-215ENST00000497139 ERCC4Q92889 916 aaPredicted RBP14.95□□□□□ -0.02
VEGFA-215ENST00000497139 USP28Q96RU2 1077 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 WDR24Q96S15 920 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 VIPAS39Q9H9C1 493 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 TOP1P11387 765 aaKnown RBP14.95□□□□□ -0.02
VEGFA-215ENST00000497139 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
VEGFA-215ENST00000497139 TRDNQ13061 729 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 MTX1Q13505 466 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 DNAAF4Q8WXU2 420 aa14.95□□□□□ -0.02
VEGFA-215ENST00000497139 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms