RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 EFCAB8A8MWE9 144 aa17.47■□□□□ 0.39
MACF1-223ENST00000496360 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
MACF1-223ENST00000496360 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
MACF1-223ENST00000496360 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
MACF1-223ENST00000496360 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
MACF1-223ENST00000496360 CHRM1P11229 460 aaPredicted RBP17.46■□□□□ 0.39
MACF1-223ENST00000496360 NOP2P46087 812 aaKnown RBP17.46■□□□□ 0.39
MACF1-223ENST00000496360 ZSCAN26Q16670 478 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 ME3Q16798 604 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 KRBA2Q6ZNG9 492 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 CDC37L1Q7L3B6 337 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 ZSCAN16Q9H4T2 348 aaPredicted RBP17.46■□□□□ 0.39
MACF1-223ENST00000496360 RSPH14Q9UHP6 348 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
MACF1-223ENST00000496360 NR1I2O75469 434 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 ST3GAL1Q11201 340 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 FBXO18Q8NFZ0 1043 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 PPP1R13BQ96KQ4 1090 aa17.46■□□□□ 0.39
MACF1-223ENST00000496360 MYO1CO00159 1063 aa17.45■□□□□ 0.38
MACF1-223ENST00000496360 IVLP07476 585 aa17.45■□□□□ 0.38
MACF1-223ENST00000496360 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
MACF1-223ENST00000496360 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
MACF1-223ENST00000496360 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
MACF1-223ENST00000496360 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
MACF1-223ENST00000496360 JAKMIP3Q5VZ66 844 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 SYT10Q6XYQ8 523 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 DNAI1Q9UI46 699 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 ETF1P62495 437 aaKnown RBP17.44■□□□□ 0.38
MACF1-223ENST00000496360 POLA2Q14181 598 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 E4F1Q66K89 784 aaPredicted RBP17.44■□□□□ 0.38
MACF1-223ENST00000496360 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 MEGF6O75095 1541 aa17.44■□□□□ 0.38
MACF1-223ENST00000496360 HIP1O00291 1037 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
MACF1-223ENST00000496360 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
MACF1-223ENST00000496360 BPIFA3Q9BQP9 254 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 RREB1Q92766 1687 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
MACF1-223ENST00000496360 TADA3O75528 432 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 GPR161Q8N6U8 529 aaKnown RBP17.43■□□□□ 0.38
MACF1-223ENST00000496360 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 NEK11Q8NG66 645 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
MACF1-223ENST00000496360 PLSCR1O15162 318 aa17.42■□□□□ 0.38
MACF1-223ENST00000496360 ARID5BQ14865 1188 aa17.42■□□□□ 0.38
MACF1-223ENST00000496360 ICE2Q659A1 982 aa17.42■□□□□ 0.38
MACF1-223ENST00000496360 SRLQ86TD4 932 aa17.42■□□□□ 0.38
MACF1-223ENST00000496360 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
MACF1-223ENST00000496360 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
MACF1-223ENST00000496360 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 F6X3S4 739 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.38
MACF1-223ENST00000496360 C11orf57Q6ZUT1 292 aaPredicted RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 DHX40Q8IX18 779 aaKnown RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 ZCRB1Q8TBF4 217 aaKnown RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 TPCN1Q9ULQ1 816 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 RGPD3A6NKT7 1758 aaPredicted RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 RGPD4Q7Z3J3 1758 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 OAS2P29728 719 aaKnown RBP17.41■□□□□ 0.38
MACF1-223ENST00000496360 CCDC30Q5VVM6 783 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 G2E3Q7L622 706 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 ATG3Q9NT62 314 aa17.41■□□□□ 0.38
MACF1-223ENST00000496360 NHSQ6T4R5 1651 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 A0A1B0GUL7 405 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 KCNQ2O43526 872 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 RPS6KA5O75582 802 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 GTF2A1P52655 376 aaPredicted RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 CCDC73Q6ZRK6 1079 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 POLR3GO15318 223 aaPredicted RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 FLIIQ13045 1269 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 RESTQ13127 1097 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 NUTM1Q86Y26 1132 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 TRERF1Q96PN7 1200 aa17.4■□□□□ 0.38
MACF1-223ENST00000496360 LARP6Q9BRS8 491 aaKnown RBP17.4■□□□□ 0.38
MACF1-223ENST00000496360 NUP188Q5SRE5 1749 aa17.39■□□□□ 0.38
MACF1-223ENST00000496360 TBC1D8O95759 1140 aa17.39■□□□□ 0.37
MACF1-223ENST00000496360 ACTN2P35609 894 aa17.39■□□□□ 0.37
MACF1-223ENST00000496360 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
MACF1-223ENST00000496360 CC2D1AQ6P1N0 951 aaPredicted RBP17.39■□□□□ 0.37
MACF1-223ENST00000496360 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
MACF1-223ENST00000496360 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
MACF1-223ENST00000496360 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms