RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCDC102AQ96A19 550 aa29.7■■■□□ 2.35
COL27A1-208ENST00000494780 MYOZ2Q9NPC6 264 aa29.7■■■□□ 2.35
COL27A1-208ENST00000494780 SPEF2Q9C093 1822 aa29.69■■■□□ 2.34
COL27A1-208ENST00000494780 ANGEL2Q5VTE6 544 aaKnown RBP29.69■■■□□ 2.34
COL27A1-208ENST00000494780 ZIC5Q96T25 663 aa29.69■■■□□ 2.34
COL27A1-208ENST00000494780 LEMD3Q9Y2U8 911 aa29.69■■■□□ 2.34
COL27A1-208ENST00000494780 FAM155AB1AL88 458 aaPredicted RBP29.68■■■□□ 2.34
COL27A1-208ENST00000494780 ANP32CO43423 234 aa29.68■■■□□ 2.34
COL27A1-208ENST00000494780 VAMP4O75379 141 aa29.68■■■□□ 2.34
COL27A1-208ENST00000494780 LINS1Q8NG48 757 aa29.68■■■□□ 2.34
COL27A1-208ENST00000494780 CDCA5Q96FF9 252 aa29.68■■■□□ 2.34
COL27A1-208ENST00000494780 ITGA6P23229 1130 aa29.67■■■□□ 2.34
COL27A1-208ENST00000494780 CASP7P55210 303 aa29.67■■■□□ 2.34
COL27A1-208ENST00000494780 COA1Q9GZY4 146 aa29.67■■■□□ 2.34
COL27A1-208ENST00000494780 PITPNM2Q9BZ72 1349 aa29.67■■■□□ 2.34
COL27A1-208ENST00000494780 CACNA1FO60840 1977 aa29.66■■■□□ 2.34
COL27A1-208ENST00000494780 CSF1RP07333 972 aa29.66■■■□□ 2.34
COL27A1-208ENST00000494780 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
COL27A1-208ENST00000494780 ANKRD2Q9GZV1 360 aa29.66■■■□□ 2.34
COL27A1-208ENST00000494780 ZNF157P51786 506 aaPredicted RBP29.65■■■□□ 2.34
COL27A1-208ENST00000494780 DACT2Q5SW24 774 aa29.65■■■□□ 2.34
COL27A1-208ENST00000494780 FAM161AQ3B820 660 aa29.64■■■□□ 2.34
COL27A1-208ENST00000494780 STRIP1Q5VSL9 837 aa29.64■■■□□ 2.34
COL27A1-208ENST00000494780 MPHOSPH8Q99549 860 aa29.64■■■□□ 2.34
COL27A1-208ENST00000494780 SALL2Q9Y467 1007 aaPredicted RBP29.64■■■□□ 2.34
COL27A1-208ENST00000494780 MYO3BQ8WXR4 1341 aa29.64■■■□□ 2.34
COL27A1-208ENST00000494780 EXOSC9Q06265 439 aaKnown RBP29.63■■■□□ 2.33
COL27A1-208ENST00000494780 ZNF804BA4D1E1 1349 aa29.63■■■□□ 2.33
COL27A1-208ENST00000494780 FKBP1BP68106 108 aa29.62■■■□□ 2.33
COL27A1-208ENST00000494780 KIF23Q02241 960 aaPredicted RBP29.62■■■□□ 2.33
COL27A1-208ENST00000494780 TXNRD3Q86VQ6 643 aa29.62■■■□□ 2.33
COL27A1-208ENST00000494780 OGFOD1Q8N543 542 aa29.62■■■□□ 2.33
COL27A1-208ENST00000494780 SLC10A3P09131 477 aa29.61■■■□□ 2.33
COL27A1-208ENST00000494780 MMP14P50281 582 aa29.61■■■□□ 2.33
COL27A1-208ENST00000494780 FBXW7Q969H0 707 aa29.6■■■□□ 2.33
COL27A1-208ENST00000494780 MXD3Q9BW11 206 aa29.6■■■□□ 2.33
COL27A1-208ENST00000494780 SAGE1Q9NXZ1 904 aa29.6■■■□□ 2.33
COL27A1-208ENST00000494780 ZNF646O15015 1829 aaPredicted RBP29.59■■■□□ 2.33
COL27A1-208ENST00000494780 ANKRD18BA2A2Z9 1011 aa29.59■■■□□ 2.33
COL27A1-208ENST00000494780 ZNF316A6NFI3 1004 aaPredicted RBP29.59■■■□□ 2.33
COL27A1-208ENST00000494780 NBPF9Q3BBW0 867 aa29.58■■■□□ 2.33
COL27A1-208ENST00000494780 CASP8AP2Q9UKL3 1982 aa29.58■■■□□ 2.33
COL27A1-208ENST00000494780 PAPPA2Q9BXP8 1791 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 KLRK1P26718 216 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 KCNJ4P48050 445 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 CHRNDQ07001 517 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 BEND3Q5T5X7 828 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 TTLL5Q6EMB2 1281 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 MCOLN1Q9GZU1 580 aa29.57■■■□□ 2.32
COL27A1-208ENST00000494780 CCDC85CA6NKD9 419 aa29.56■■■□□ 2.32
COL27A1-208ENST00000494780 WNT10BO00744 389 aa29.56■■■□□ 2.32
COL27A1-208ENST00000494780 F6X3S4 739 aa29.55■■■□□ 2.32
COL27A1-208ENST00000494780 FOXO4P98177 505 aa29.55■■■□□ 2.32
COL27A1-208ENST00000494780 RASAL3Q86YV0 1011 aa29.55■■■□□ 2.32
COL27A1-208ENST00000494780 REM2Q8IYK8 340 aaPredicted RBP29.55■■■□□ 2.32
COL27A1-208ENST00000494780 SPINK5Q9NQ38 1064 aaPredicted RBP29.55■■■□□ 2.32
COL27A1-208ENST00000494780 IFIT5Q13325 482 aaKnown RBP29.54■■■□□ 2.32
COL27A1-208ENST00000494780 RNF186Q9NXI6 227 aa29.54■■■□□ 2.32
COL27A1-208ENST00000494780 CSRNP1Q96S65 589 aa29.53■■■□□ 2.32
COL27A1-208ENST00000494780 HDAC9Q9UKV0 1011 aa29.53■■■□□ 2.32
COL27A1-208ENST00000494780 SCAF8Q9UPN6 1271 aaKnown RBP29.53■■■□□ 2.32
COL27A1-208ENST00000494780 GTF2IP78347 998 aa29.52■■■□□ 2.32
COL27A1-208ENST00000494780 DGKZQ13574 1117 aa29.52■■■□□ 2.32
COL27A1-208ENST00000494780 C15orf52Q6ZUT6 534 aaKnown RBP29.52■■■□□ 2.32
COL27A1-208ENST00000494780 CD209Q9NNX6 404 aa29.52■■■□□ 2.32
COL27A1-208ENST00000494780 TRPA1O75762 1119 aa29.51■■■□□ 2.31
COL27A1-208ENST00000494780 KIAA0825Q8IV33 1275 aa29.51■■■□□ 2.31
COL27A1-208ENST00000494780 CHMP3Q9Y3E7 222 aa29.51■■■□□ 2.31
COL27A1-208ENST00000494780 IRS2Q9Y4H2 1338 aa29.5■■■□□ 2.31
COL27A1-208ENST00000494780 PRAMEF18Q5VWM3 479 aa29.5■■■□□ 2.31
COL27A1-208ENST00000494780 AKAP11Q9UKA4 1901 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 GRM8O00222 908 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 TAF5LO75529 589 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 SASH1O94885 1247 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 NF2P35240 595 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 MOB2Q70IA6 237 aa29.49■■■□□ 2.31
COL27A1-208ENST00000494780 UBE2Q2LH0YL09 131 aa29.48■■■□□ 2.31
COL27A1-208ENST00000494780 LMBR1LQ6UX01 489 aa29.48■■■□□ 2.31
COL27A1-208ENST00000494780 FAM9BQ8IZU0 186 aa29.48■■■□□ 2.31
COL27A1-208ENST00000494780 HELBQ8NG08 1087 aaPredicted RBP29.48■■■□□ 2.31
COL27A1-208ENST00000494780 ZBED3Q96IU2 234 aaPredicted RBP29.48■■■□□ 2.31
COL27A1-208ENST00000494780 SNAP23O00161 211 aa29.47■■■□□ 2.31
COL27A1-208ENST00000494780 CCDC57Q2TAC2 916 aa29.47■■■□□ 2.31
COL27A1-208ENST00000494780 APOBEC3FQ8IUX4 373 aaKnown RBP29.47■■■□□ 2.31
COL27A1-208ENST00000494780 ALDH1L1O75891 902 aa29.46■■■□□ 2.31
COL27A1-208ENST00000494780 RGS19P49795 217 aa29.46■■■□□ 2.31
COL27A1-208ENST00000494780 TTLL12Q14166 644 aaPredicted RBP29.46■■■□□ 2.31
COL27A1-208ENST00000494780 EPHA10Q5JZY3 1008 aa29.46■■■□□ 2.31
COL27A1-208ENST00000494780 A0A1B0GUL6 1792 aa29.45■■■□□ 2.31
COL27A1-208ENST00000494780 ZNF804AQ7Z570 1209 aa29.45■■■□□ 2.31
COL27A1-208ENST00000494780 C9orf78Q9NZ63 289 aaPredicted RBP29.45■■■□□ 2.31
COL27A1-208ENST00000494780 IL1R1P14778 569 aa29.44■■■□□ 2.3
COL27A1-208ENST00000494780 TAF7LQ5H9L4 462 aa29.44■■■□□ 2.3
COL27A1-208ENST00000494780 LDHAL6AQ6ZMR3 332 aa29.44■■■□□ 2.3
COL27A1-208ENST00000494780 CERS5Q8N5B7 392 aa29.43■■■□□ 2.3
COL27A1-208ENST00000494780 SRCIN1Q9C0H9 1055 aa29.43■■■□□ 2.3
COL27A1-208ENST00000494780 FKBP1AP62942 108 aaKnown RBP29.42■■■□□ 2.3
COL27A1-208ENST00000494780 DLGAP5Q15398 846 aa29.42■■■□□ 2.3
COL27A1-208ENST00000494780 MTMR14Q8NCE2 650 aa29.42■■■□□ 2.3
COL27A1-208ENST00000494780 ZNF594Q96JF6 807 aaPredicted RBP29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms