RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 PLA2G12BQ9BX93 195 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 MYH16Q9H6N6 1097 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 GBA2Q9HCG7 927 aaPredicted RBP11.65□□□□□ -0.54
NFIA-213ENST00000493627 MINPP1Q9UNW1 487 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
NFIA-213ENST00000493627 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 USP17L8P0C7I0 530 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 IGHMBP2P38935 993 aaKnown RBP11.64□□□□□ -0.55
NFIA-213ENST00000493627 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
NFIA-213ENST00000493627 CASP7P55210 303 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 EXOSC9Q06265 439 aaKnown RBP11.64□□□□□ -0.55
NFIA-213ENST00000493627 ANGEL2Q5VTE6 544 aaKnown RBP11.64□□□□□ -0.55
NFIA-213ENST00000493627 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 WDR63Q8IWG1 891 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 C2orf69Q8N8R5 385 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 LINS1Q8NG48 757 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 GMLQ99445 158 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 MYOZ2Q9NPC6 264 aa11.64□□□□□ -0.55
NFIA-213ENST00000493627 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
NFIA-213ENST00000493627 VAMP4O75379 141 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 ITGA6P23229 1130 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 SCARF1Q14162 830 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
NFIA-213ENST00000493627 CDCA5Q96FF9 252 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 ABHD8Q96I13 439 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
NFIA-213ENST00000493627 PITPNM2Q9BZ72 1349 aa11.62□□□□□ -0.55
NFIA-213ENST00000493627 DACT2Q5SW24 774 aa11.62□□□□□ -0.55
NFIA-213ENST00000493627 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
NFIA-213ENST00000493627 MPHOSPH8Q99549 860 aa11.62□□□□□ -0.55
NFIA-213ENST00000493627 LEMD3Q9Y2U8 911 aa11.62□□□□□ -0.55
NFIA-213ENST00000493627 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
NFIA-213ENST00000493627 ZNF804BA4D1E1 1349 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 MYO3BQ8WXR4 1341 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
NFIA-213ENST00000493627 F6X3S4 739 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 CSF1RP07333 972 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 KLRK1P26718 216 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 ZNF157P51786 506 aaPredicted RBP11.61□□□□□ -0.55
NFIA-213ENST00000493627 TXNRD3Q86VQ6 643 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 CCDC102AQ96A19 550 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 ANKRD2Q9GZV1 360 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 COA1Q9GZY4 146 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
NFIA-213ENST00000493627 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
NFIA-213ENST00000493627 PAPPA2Q9BXP8 1791 aa11.61□□□□□ -0.55
NFIA-213ENST00000493627 ANKRD18BA2A2Z9 1011 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 SLC10A3P09131 477 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 KCNJ4P48050 445 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 CHRNDQ07001 517 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 OGFOD1Q8N543 542 aa11.6□□□□□ -0.55
NFIA-213ENST00000493627 SASH1O94885 1247 aa11.59□□□□□ -0.55
NFIA-213ENST00000493627 KIF23Q02241 960 aaPredicted RBP11.59□□□□□ -0.55
NFIA-213ENST00000493627 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
NFIA-213ENST00000493627 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
NFIA-213ENST00000493627 SCAF8Q9UPN6 1271 aaKnown RBP11.59□□□□□ -0.55
NFIA-213ENST00000493627 CHMP3Q9Y3E7 222 aa11.59□□□□□ -0.55
NFIA-213ENST00000493627 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 WNT10BO00744 389 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 FKBP1BP68106 108 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 FOXO4P98177 505 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
NFIA-213ENST00000493627 RASAL3Q86YV0 1011 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 SAGE1Q9NXZ1 904 aa11.58□□□□□ -0.56
NFIA-213ENST00000493627 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
NFIA-213ENST00000493627 A0A1B0GUL6 1792 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 GRM8O00222 908 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 GTF2IP78347 998 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 TTLL5Q6EMB2 1281 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 KIAA0825Q8IV33 1275 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 MCOLN1Q9GZU1 580 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 HDAC9Q9UKV0 1011 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 IRS2Q9Y4H2 1338 aa11.57□□□□□ -0.56
NFIA-213ENST00000493627 SNAP23O00161 211 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 TAF5LO75529 589 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 MMP14P50281 582 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 C15orf52Q6ZUT6 534 aaKnown RBP11.56□□□□□ -0.56
NFIA-213ENST00000493627 MOB2Q70IA6 237 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 HELBQ8NG08 1087 aaPredicted RBP11.56□□□□□ -0.56
NFIA-213ENST00000493627 CD209Q9NNX6 404 aa11.56□□□□□ -0.56
NFIA-213ENST00000493627 CCDC85CA6NKD9 419 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 DGKZQ13574 1117 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 TTLL12Q14166 644 aaPredicted RBP11.55□□□□□ -0.56
NFIA-213ENST00000493627 CCDC57Q2TAC2 916 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 TAF7LQ5H9L4 462 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 ZNF804AQ7Z570 1209 aa11.55□□□□□ -0.56
NFIA-213ENST00000493627 APOBEC3FQ8IUX4 373 aaKnown RBP11.55□□□□□ -0.56
NFIA-213ENST00000493627 ZBED3Q96IU2 234 aaPredicted RBP11.55□□□□□ -0.56
NFIA-213ENST00000493627 ZNF594Q96JF6 807 aaPredicted RBP11.55□□□□□ -0.56
NFIA-213ENST00000493627 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms