RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 APLP1P51693 650 aa15.33■□□□□ 0.04
C9orf16-202ENST00000486420 OS9Q13438 667 aaPredicted RBP15.33■□□□□ 0.04
C9orf16-202ENST00000486420 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
C9orf16-202ENST00000486420 VPS37DQ86XT2 251 aa15.33■□□□□ 0.04
C9orf16-202ENST00000486420 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
C9orf16-202ENST00000486420 GNL3LQ9NVN8 582 aaKnown RBP15.33■□□□□ 0.04
C9orf16-202ENST00000486420 ECE2O60344 883 aa15.32■□□□□ 0.04
C9orf16-202ENST00000486420 CENPBP07199 599 aaPredicted RBP15.32■□□□□ 0.04
C9orf16-202ENST00000486420 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
C9orf16-202ENST00000486420 SMC1BQ8NDV3 1235 aa15.32■□□□□ 0.04
C9orf16-202ENST00000486420 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
C9orf16-202ENST00000486420 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
C9orf16-202ENST00000486420 TAF1P21675 1872 aa15.31■□□□□ 0.04
C9orf16-202ENST00000486420 RIMBP2O15034 1052 aa15.31■□□□□ 0.04
C9orf16-202ENST00000486420 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
C9orf16-202ENST00000486420 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
C9orf16-202ENST00000486420 DPF2Q92785 391 aa15.31■□□□□ 0.04
C9orf16-202ENST00000486420 ZNF609O15014 1411 aa15.31■□□□□ 0.04
C9orf16-202ENST00000486420 USP17L3A6NCW0 530 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 USP17L4A6NCW7 530 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 SEMA3EO15041 775 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
C9orf16-202ENST00000486420 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
C9orf16-202ENST00000486420 FKBP1AP62942 108 aaKnown RBP15.3■□□□□ 0.04
C9orf16-202ENST00000486420 LRRC24Q50LG9 513 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 STRIP1Q5VSL9 837 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 USP17L1Q7RTZ2 530 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 ATG9AQ7Z3C6 839 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 VGLL2Q8N8G2 317 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 SIL1Q9H173 461 aa15.3■□□□□ 0.04
C9orf16-202ENST00000486420 PNMA6EA0A0J9YXQ4 647 aa15.29■□□□□ 0.04
C9orf16-202ENST00000486420 IGSF3O75054 1194 aa15.29■□□□□ 0.04
C9orf16-202ENST00000486420 TAF5LO75529 589 aa15.29■□□□□ 0.04
C9orf16-202ENST00000486420 ATP2B3Q16720 1220 aa15.29■□□□□ 0.04
C9orf16-202ENST00000486420 TBC1D22AQ8WUA7 517 aa15.29■□□□□ 0.04
C9orf16-202ENST00000486420 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
C9orf16-202ENST00000486420 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
C9orf16-202ENST00000486420 IL1R1P14778 569 aa15.28■□□□□ 0.04
C9orf16-202ENST00000486420 CXCL9Q07325 125 aa15.28■□□□□ 0.04
C9orf16-202ENST00000486420 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
C9orf16-202ENST00000486420 KLHDC4Q8TBB5 520 aa15.28■□□□□ 0.04
C9orf16-202ENST00000486420 HACL1Q9UJ83 578 aa15.28■□□□□ 0.04
C9orf16-202ENST00000486420 COL4A5P29400 1685 aa15.28■□□□□ 0.04
C9orf16-202ENST00000486420 ADAMTSL1Q8N6G6 1762 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 H7C1D1 291 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 SASH1O94885 1247 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.04
C9orf16-202ENST00000486420 FGFR2P21802 821 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 C20orf194Q5TEA3 1177 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 OGFOD1Q8N543 542 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 KIF1BPQ96EK5 621 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 C1orf115Q9H7X2 142 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 DBNDD1Q9H9R9 158 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 CD209Q9NNX6 404 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
C9orf16-202ENST00000486420 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.04
C9orf16-202ENST00000486420 COL4A1P02462 1669 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 POTECB2RU33 542 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
C9orf16-202ENST00000486420 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 GORABQ5T7V8 394 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 USP50Q70EL3 339 aaPredicted RBP15.26■□□□□ 0.03
C9orf16-202ENST00000486420 FBXO33Q7Z6M2 555 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
C9orf16-202ENST00000486420 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
C9orf16-202ENST00000486420 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
C9orf16-202ENST00000486420 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
C9orf16-202ENST00000486420 RAD17O75943 681 aa15.25■□□□□ 0.03
C9orf16-202ENST00000486420 TTLL5Q6EMB2 1281 aa15.25■□□□□ 0.03
C9orf16-202ENST00000486420 RSBN1LQ6PCB5 846 aaPredicted RBP15.25■□□□□ 0.03
C9orf16-202ENST00000486420 CLASRPQ8N2M8 674 aaKnown RBP15.25■□□□□ 0.03
C9orf16-202ENST00000486420 ADARB2Q9NS39 739 aaKnown RBP15.25■□□□□ 0.03
C9orf16-202ENST00000486420 A0A1B0GUL6 1792 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 PDS5AQ29RF7 1337 aaKnown RBP15.24■□□□□ 0.03
C9orf16-202ENST00000486420 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 UQCRFS1P1P0C7P4 283 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 TFCP2Q12800 502 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 CCDC158Q5M9N0 1113 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 TMED8Q6PL24 325 aaPredicted RBP15.24■□□□□ 0.03
C9orf16-202ENST00000486420 TDRD7Q8NHU6 1098 aaKnown RBP15.24■□□□□ 0.03
C9orf16-202ENST00000486420 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 FAM84BQ96KN1 310 aaPredicted RBP15.24■□□□□ 0.03
C9orf16-202ENST00000486420 GPRC5DQ9NZD1 345 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 DENND2AQ9ULE3 1009 aa15.24■□□□□ 0.03
C9orf16-202ENST00000486420 MAST3O60307 1309 aa15.23■□□□□ 0.03
C9orf16-202ENST00000486420 A0A1B0GUL7 405 aa15.23■□□□□ 0.03
C9orf16-202ENST00000486420 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
C9orf16-202ENST00000486420 PSMD14O00487 310 aa15.23■□□□□ 0.03
C9orf16-202ENST00000486420 ZC3H15Q8WU90 426 aaKnown RBP15.23■□□□□ 0.03
C9orf16-202ENST00000486420 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
C9orf16-202ENST00000486420 USP17L8P0C7I0 530 aa15.22■□□□□ 0.03
C9orf16-202ENST00000486420 EPHX2P34913 555 aa15.22■□□□□ 0.03
C9orf16-202ENST00000486420 GMPSP49915 693 aaPredicted RBP15.22■□□□□ 0.03
C9orf16-202ENST00000486420 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
C9orf16-202ENST00000486420 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms