RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CHRNDQ07001 517 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 STRIP1Q5VSL9 837 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 PSME4Q14997 1843 aa12.34□□□□□ -0.43
TMEM39A-207ENST00000482162 G3V3G9 751 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 KLRK1P26718 216 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 MAP2K2P36507 400 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 ECE1P42892 770 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 KIF4BQ2VIQ3 1234 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 PTPRCP08575 1304 aa12.33□□□□□ -0.44
TMEM39A-207ENST00000482162 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 NBPF7P0C2Y1 421 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 DLK2Q6UY11 383 aa12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
TMEM39A-207ENST00000482162 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 SCARF1Q14162 830 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 CYP4F22Q6NT55 531 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 C9orf78Q9NZ63 289 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
TMEM39A-207ENST00000482162 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 SNAP23O00161 211 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 IL1R1P14778 569 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
TMEM39A-207ENST00000482162 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 TAF5LO75529 589 aa12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-207ENST00000482162 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 WNT10BO00744 389 aa12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 AIDAQ96BJ3 306 aa12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-207ENST00000482162 SPEF2Q9C093 1822 aa12.27□□□□□ -0.44
TMEM39A-207ENST00000482162 AOC2O75106 756 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 LBX1P52954 281 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 HUNKP57058 714 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 FKBP1BP68106 108 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 GTF2IP78347 998 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 UBE4AQ14139 1066 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 NBPF9Q3BBW0 867 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 CERS5Q8N5B7 392 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 MTMR14Q8NCE2 650 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 BICC1Q9H694 974 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
TMEM39A-207ENST00000482162 SASH1O94885 1247 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 KCNJ4P48050 445 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 NOGQ13253 232 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 TDRD7Q8NHU6 1098 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 CNNM1Q9NRU3 951 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
TMEM39A-207ENST00000482162 CA12O43570 354 aa12.25□□□□□ -0.45
TMEM39A-207ENST00000482162 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
TMEM39A-207ENST00000482162 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
TMEM39A-207ENST00000482162 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-207ENST00000482162 A0A1B0GUL6 1792 aa12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-207ENST00000482162 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1713.8 ms