RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ME1P48163 572 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 NBPF11Q86T75 865 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 PPP1R13BQ96KQ4 1090 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 USP28Q96RU2 1077 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 POLR3EQ9NVU0 708 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
NR1H3-220ENST00000481020 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 ZNF609O15014 1411 aa16.67■□□□□ 0.26
NR1H3-220ENST00000481020 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 CBFA2T2O43439 604 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 KCNQ3O43525 872 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 DHX16O60231 1041 aaKnown RBP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 E4F1Q66K89 784 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 KBTBD3Q8NAB2 608 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 SDF4Q9BRK5 362 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.26
NR1H3-220ENST00000481020 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
NR1H3-220ENST00000481020 GOLGA6L9A6NEM1 432 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 ETF1P62495 437 aaKnown RBP16.65■□□□□ 0.26
NR1H3-220ENST00000481020 GCKRQ14397 625 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 NAA30Q147X3 362 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-220ENST00000481020 TEX35Q5T0J7 233 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 ERBB3P21860 1342 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 NLRP12P59046 1061 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 PSME1Q06323 249 aa16.65■□□□□ 0.26
NR1H3-220ENST00000481020 NOL10Q9BSC4 688 aaKnown RBP16.65■□□□□ 0.26
NR1H3-220ENST00000481020 METTL22Q9BUU2 404 aaPredicted RBP16.65■□□□□ 0.26
NR1H3-220ENST00000481020 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
NR1H3-220ENST00000481020 CTDNEP1O95476 244 aa16.64■□□□□ 0.25
NR1H3-220ENST00000481020 IGKV5-2P06315 115 aa16.64■□□□□ 0.25
NR1H3-220ENST00000481020 COL9A3Q14050 684 aaPredicted RBP16.64■□□□□ 0.25
NR1H3-220ENST00000481020 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
NR1H3-220ENST00000481020 LRRFIP1Q32MZ4 808 aaKnown RBP16.64■□□□□ 0.25
NR1H3-220ENST00000481020 DDX11Q96FC9 970 aa16.64■□□□□ 0.25
NR1H3-220ENST00000481020 SPEF2Q9C093 1822 aa16.64■□□□□ 0.25
NR1H3-220ENST00000481020 EFCAB8A8MWE9 144 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 ANXA1P04083 346 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 CYP2C19P33261 490 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 PROSER3Q2NL68 480 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 USHBP1Q8N6Y0 703 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 LINC00301Q8NCQ3 95 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
NR1H3-220ENST00000481020 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
NR1H3-220ENST00000481020 RFX5P48382 616 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 PDIA6Q15084 440 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 DNAI1Q9UI46 699 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 V9GYY5 206 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 TMCO3Q6UWJ1 677 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 UBXN4Q92575 508 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 XPO4Q9C0E2 1151 aaKnown RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ZNF446Q9NWS9 450 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 FHOD1Q9Y613 1164 aa16.62■□□□□ 0.25
NR1H3-220ENST00000481020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-220ENST00000481020 ZRANB2O95218 330 aaKnown RBP eCLIP16.61■□□□□ 0.25
NR1H3-220ENST00000481020 CMA1P23946 247 aa16.61■□□□□ 0.25
NR1H3-220ENST00000481020 PDIA3P30101 505 aaKnown RBP16.61■□□□□ 0.25
NR1H3-220ENST00000481020 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
NR1H3-220ENST00000481020 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
NR1H3-220ENST00000481020 CCDC158Q5M9N0 1113 aa16.61■□□□□ 0.25
NR1H3-220ENST00000481020 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
NR1H3-220ENST00000481020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.61■□□□□ 0.25
NR1H3-220ENST00000481020 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
NR1H3-220ENST00000481020 PHF8Q9UPP1 1060 aa16.61■□□□□ 0.25
NR1H3-220ENST00000481020 SMC2O95347 1197 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 TUBB4BP68371 445 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 STK38Q15208 465 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 ZMYM1Q5SVZ6 1142 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 TMC6Q7Z403 805 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 SIL1Q9H173 461 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 IFNKQ9P0W0 207 aa16.6■□□□□ 0.25
NR1H3-220ENST00000481020 SPTLC2O15270 562 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 DTNBO60941 627 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 PNMA6AP0CW24 399 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-220ENST00000481020 CLCN6P51797 869 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 CEBPZQ03701 1054 aaKnown RBP16.59■□□□□ 0.25
NR1H3-220ENST00000481020 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 SYT10Q6XYQ8 523 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 STOX1Q6ZVD7 989 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-220ENST00000481020 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-220ENST00000481020 FAM237AA0A1B0GTK4 181 aa16.59■□□□□ 0.25
NR1H3-220ENST00000481020 TULP2O00295 520 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms