RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 NRBP1Q9UHY1 535 aa15.26■□□□□ 0.03
CCNL1-216ENST00000475298 V9GYY5 206 aaPredicted RBP15.26■□□□□ 0.03
CCNL1-216ENST00000475298 WDR17Q8IZU2 1322 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.25■□□□□ 0.03
CCNL1-216ENST00000475298 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 FERMT3Q86UX7 667 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.25■□□□□ 0.03
CCNL1-216ENST00000475298 PCDH11XQ9BZA7 1347 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 PCDH11YQ9BZA8 1340 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 JCADQ9P266 1359 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 H7C1W4 665 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 FAM173BQ6P4H8 233 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 ZNF594Q96JF6 807 aaPredicted RBP15.25■□□□□ 0.03
CCNL1-216ENST00000475298 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
CCNL1-216ENST00000475298 NOL10Q9BSC4 688 aaKnown RBP15.25■□□□□ 0.03
CCNL1-216ENST00000475298 XIRP1Q702N8 1843 aaKnown RBP15.25■□□□□ 0.03
CCNL1-216ENST00000475298 TIMM10P62072 90 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 ATG9AQ7Z3C6 839 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 STRN4Q9NRL3 753 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 PARP4Q9UKK3 1724 aaKnown RBP15.24■□□□□ 0.03
CCNL1-216ENST00000475298 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
CCNL1-216ENST00000475298 CEP135Q66GS9 1140 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 HAUS7Q99871 368 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 EFCC1Q9HA90 598 aa15.24■□□□□ 0.03
CCNL1-216ENST00000475298 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
CCNL1-216ENST00000475298 ELF2Q15723 593 aa15.23■□□□□ 0.03
CCNL1-216ENST00000475298 LRRC24Q50LG9 513 aa15.23■□□□□ 0.03
CCNL1-216ENST00000475298 ZNF330Q9Y3S2 320 aaPredicted RBP15.23■□□□□ 0.03
CCNL1-216ENST00000475298 YY1AP1Q9H869 796 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 TJP1Q07157 1748 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 NUP188Q5SRE5 1749 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 COL5A2P05997 1499 aaPredicted RBP15.22■□□□□ 0.03
CCNL1-216ENST00000475298 GOLIM4O00461 696 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 TPD52L1Q16890 204 aaPredicted RBP15.22■□□□□ 0.03
CCNL1-216ENST00000475298 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 LRRC2Q9BYS8 371 aa15.22■□□□□ 0.03
CCNL1-216ENST00000475298 NOP2P46087 812 aaKnown RBP15.21■□□□□ 0.03
CCNL1-216ENST00000475298 HMG20BQ9P0W2 317 aa15.21■□□□□ 0.03
CCNL1-216ENST00000475298 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.03
CCNL1-216ENST00000475298 CYP21A2P08686 494 aa15.21■□□□□ 0.03
CCNL1-216ENST00000475298 CACTINQ8WUQ7 758 aaKnown RBP15.21■□□□□ 0.03
CCNL1-216ENST00000475298 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
CCNL1-216ENST00000475298 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
CCNL1-216ENST00000475298 PLEKHG2Q9H7P9 1386 aa15.21■□□□□ 0.03
CCNL1-216ENST00000475298 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 IL2RBP14784 551 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 MCMDC2Q4G0Z9 681 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 FAM200AQ8TCP9 573 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
CCNL1-216ENST00000475298 RSPH14Q9UHP6 348 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 FHOD1Q9Y613 1164 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 A0A0G2JLW4 131 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 JAK2O60674 1132 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 CCDC192P0DO97 292 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 ANKRD1Q15327 319 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 LUZP1Q86V48 1076 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 PLA2G4DQ86XP0 818 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 CHMP4CQ96CF2 233 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
CCNL1-216ENST00000475298 USP27XA6NNY8 438 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 Q6ZUG5 572 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 GTF3C6Q969F1 213 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 GEMIN8Q9NWZ8 242 aaKnown RBP15.19■□□□□ 0.02
CCNL1-216ENST00000475298 MRVI1Q9Y6F6 885 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 H2AFXP16104 143 aaPredicted RBP15.19■□□□□ 0.02
CCNL1-216ENST00000475298 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 SHANK3Q9BYB0 1731 aa15.19■□□□□ 0.02
CCNL1-216ENST00000475298 ZNF75DP51815 510 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 BMS1Q14692 1282 aaKnown RBP15.18■□□□□ 0.02
CCNL1-216ENST00000475298 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
CCNL1-216ENST00000475298 PLA2G4AP47712 749 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 MMP14P50281 582 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
CCNL1-216ENST00000475298 CCDC144BQ3MJ40 725 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 CCDC144CPQ8IYA2 1237 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 CCDC191Q8NCU4 936 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 ALDH8A1Q9H2A2 487 aaPredicted RBP15.18■□□□□ 0.02
CCNL1-216ENST00000475298 SLAIN2Q9P270 581 aa15.18■□□□□ 0.02
CCNL1-216ENST00000475298 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
CCNL1-216ENST00000475298 A0A1B0GUL7 405 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 EYA2O00167 538 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
CCNL1-216ENST00000475298 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
CCNL1-216ENST00000475298 NEK11Q8NG66 645 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 TFIP11Q9UBB9 837 aaKnown RBP15.17■□□□□ 0.02
CCNL1-216ENST00000475298 PAPPAQ13219 1627 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
CCNL1-216ENST00000475298 KRT32Q14532 448 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms