RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LZTFL1Q9NQ48 299 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ODF2LQ9ULJ1 636 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 AKAP2Q9Y2D5 859 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ZNF330Q9Y3S2 320 aaPredicted RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ABCC2Q92887 1545 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 PTPRKQ15262 1439 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 GRIN2BQ13224 1484 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 ATP2C2O75185 946 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 TRIM21P19474 475 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CLUL1Q15846 466 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC174Q6PII3 467 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 CEP128Q6ZU80 1094 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 HOOK3Q86VS8 718 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 LEO1Q8WVC0 666 aaPredicted RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 LARSQ9P2J5 1176 aaKnown RBP5.67□□□□□ -1.5
PCDH9-203ENST00000456367 USH1CQ9Y6N9 552 aa5.67□□□□□ -1.5
PCDH9-203ENST00000456367 HMGXB3Q12766 1538 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 PNMA6AP0CW24 399 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RAD51AP2Q09MP3 1159 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ATP2B3Q16720 1220 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 MUM1L1Q5H9M0 696 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 TADA2BQ86TJ2 420 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CCHCR1Q8TD31 782 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 TBC1D31Q96DN5 1066 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC42Q96M95 316 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CEP63Q96MT8 703 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC43Q96MW1 224 aaKnown RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 TEX14Q8IWB6 1497 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 GADD45BO75293 160 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 PSME1Q06323 249 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CUL4AQ13619 759 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 SRGAP1Q7Z6B7 1085 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 NECAB1Q8N987 351 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 BCAS4Q8TDM0 211 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ANKRD7Q92527 254 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 NUP58Q9BVL2 599 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 PLCB1Q9NQ66 1216 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 MTRF1LQ9UGC7 380 aaKnown RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RGS12O14924 1447 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ABCA10Q8WWZ4 1543 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 GSTTP1A0A1W2PQM5 241 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 PSMA7O14818 248 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 MAP7Q14244 749 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 TMEM132EQ6IEE7 984 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RNF41Q9H4P4 317 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ZNF213O14771 459 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 STX10O60499 249 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 POTEJP0CG39 1038 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RASSF2P50749 326 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 GNGT1P63211 74 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RBM6P78332 1123 aaKnown RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 IRX1P78414 480 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 FLIIQ13045 1269 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 LONRF2Q1L5Z9 754 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 LARP1Q6PKG0 1096 aaKnown RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ZNF365Q70YC5 407 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 ARHGAP24Q8N264 748 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC26Q8TAB7 109 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 RAB3IPQ96QF0 476 aaPredicted RBP5.66□□□□□ -1.5
PCDH9-203ENST00000456367 TESK2Q96S53 571 aa5.66□□□□□ -1.5
PCDH9-203ENST00000456367 FAM135BQ49AJ0 1406 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CYP2C19P33261 490 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 LIG3P49916 1009 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CCDC122Q5T0U0 273 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 INTS8Q75QN2 995 aaKnown RBP5.65□□□□□ -1.5
PCDH9-203ENST00000456367 NCOA7Q8NI08 942 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 MICAL1Q8TDZ2 1067 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 NAP1L3Q99457 506 aaPredicted RBP5.65□□□□□ -1.5
PCDH9-203ENST00000456367 TCEAL9Q9UHQ7 104 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 GUCA1BQ9UMX6 200 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 PRG4Q92954 1404 aaPredicted RBP5.65□□□□□ -1.5
PCDH9-203ENST00000456367 A0A087WZG4 1122 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 BICDL2A1A5D9 508 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 LRRD1A4D1F6 860 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CLCN6P51797 869 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 GUCY1B3Q02153 619 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 NBPF9Q3BBW0 867 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 C8orf74Q6P047 294 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CERS3Q8IU89 383 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 TMTC2Q8N394 836 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CDK19Q9BWU1 502 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 PSD3Q9NYI0 1048 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 CDC23Q9UJX2 597 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 SLC12A7Q9Y666 1083 aa5.65□□□□□ -1.5
PCDH9-203ENST00000456367 GOLGA8AA7E2F4 631 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 VAMP4O75379 141 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 CREB3L3Q68CJ9 461 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 VPS37DQ86XT2 251 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 RPUSD2Q8IZ73 545 aaKnown RBP5.65□□□□□ -1.51
PCDH9-203ENST00000456367 IGSF22Q8N9C0 903 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 STMN2Q93045 179 aa5.65□□□□□ -1.51
PCDH9-203ENST00000456367 SMC6Q96SB8 1091 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms