RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PROX2Q3B8N5 592 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ACBD5Q5T8D3 534 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ALKBH2Q6NS38 261 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SAMD14Q8IZD0 417 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 NDUFAF2Q8N183 169 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SLC43A3Q8NBI5 491 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ATRIPQ8WXE1 791 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 JDP2Q8WYK2 163 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SYAP1Q96A49 352 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 FAXDC2Q96IV6 333 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 PDGFDQ9GZP0 370 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SPC25Q9HBM1 224 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TMEM165Q9HC07 324 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 UBAP1Q9NZ09 502 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 OGFRQ9NZT2 677 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SPATA7Q9P0W8 599 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TMEM98Q9Y2Y6 226 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 NEBLO76041 1014 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TPP2P29144 1249 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TERF2Q15554 542 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SLC5A9Q2M3M2 681 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 FILIP1LQ4L180 1135 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 MSL1Q68DK7 614 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SUGP1Q8IWZ8 645 aaKnown RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 STK11IPQ8N1F8 1099 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SLC39A7Q92504 469 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 L3MBTL3Q96JM7 780 aaPredicted RBP5.79□□□□□ -1.48
EPHA3-202ENST00000452448 SLC39A3Q9BRY0 314 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TRIM7Q9C029 511 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 TCEAL9Q9UHQ7 104 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ZMIZ1Q9ULJ6 1067 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 MAFFQ9ULX9 164 aa5.79□□□□□ -1.48
EPHA3-202ENST00000452448 ABCA5Q8WWZ7 1642 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 ADAMTS12P58397 1594 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 UHRF1BP1LA0JNW5 1464 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 A0A1B0GUL7 405 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 TMEM110-MUSTN1A8MSY1 372 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SSTR3P32745 418 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 CLK2P49760 499 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 DDB1Q16531 1140 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 KIF4BQ2VIQ3 1234 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 CCDC93Q567U6 631 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 PDCL2Q8N4E4 241 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SLAIN1Q8ND83 568 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SMARCC1Q92922 1105 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 NACC2Q96BF6 587 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 JPH4Q96JJ6 628 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 MPHOSPH6Q99547 160 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 CAPN10Q9HC96 672 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 DDX56Q9NY93 547 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 ZNF652Q9Y2D9 606 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 RBP3P10745 1247 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 TNNI2P48788 182 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 HNRNPH2P55795 449 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SH3BGRP55822 239 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 XPCQ01831 940 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 NOLC1Q14978 699 aaKnown RBP eCLIP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 TOMM20Q15388 145 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 C6orf132Q5T0Z8 1188 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 RNF187Q5TA31 235 aaPredicted RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 ANKRD45Q5TZF3 282 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 GPR153Q6NV75 609 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 GIMAP1Q8WWP7 306 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 ERP27Q96DN0 273 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 NAP1L4Q99733 375 aaKnown RBP5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SLAIN2Q9P270 581 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 SEL1LQ9UBV2 794 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 HDAC9Q9UKV0 1011 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 LHX6Q9UPM6 363 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 AXIN2Q9Y2T1 843 aa5.78□□□□□ -1.48
EPHA3-202ENST00000452448 FMN1Q68DA7 1419 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 BBOX1O75936 387 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 CYP11B2P19099 503 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 DNAJA1P31689 397 aaKnown RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 RBBP5Q15291 538 aaKnown RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 LDLRAD1Q5T700 205 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 CCDC65Q8IXS2 484 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 C10orf67Q8IYJ2 551 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 SP7Q8TDD2 431 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 RPAP3Q9H6T3 665 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 LMCD1Q9NZU5 365 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 CHMP3Q9Y3E7 222 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 SETD1BQ9UPS6 1966 aaKnown RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 ELL2O00472 640 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 AP1G2O75843 785 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 VAC14Q08AM6 782 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 DBN1Q16643 649 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 TTC31Q49AM3 519 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 ZNF746Q6NUN9 644 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 FAM117BQ6P1L5 589 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 ARMC9Q7Z3E5 817 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 GOLGA1Q92805 767 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 MRFAP1L1Q96HT8 127 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 IWS1Q96ST2 819 aa5.77□□□□□ -1.49
EPHA3-202ENST00000452448 BAG1Q99933 345 aaPredicted RBP5.77□□□□□ -1.49
EPHA3-202ENST00000452448 TSKSQ9UJT2 592 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms