RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 MINPP1Q9UNW1 487 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 ITGA6P23229 1130 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 CXCL9Q07325 125 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 AAMPQ13685 434 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 CIAPIN1Q6FI81 312 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 PNMA8AQ86V59 439 aaPredicted RBP11.43□□□□□ -0.58
RFX3-207ENST00000449190 GGA1Q9UJY5 639 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 GJA3Q9Y6H8 435 aa11.43□□□□□ -0.58
RFX3-207ENST00000449190 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
RFX3-207ENST00000449190 XDHP47989 1333 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 LAMB2P55268 1798 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 RIMBP2O15034 1052 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 EPHX2P34913 555 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 APLP1P51693 650 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 RABL6Q3YEC7 729 aaPredicted RBP11.42□□□□□ -0.58
RFX3-207ENST00000449190 MPHOSPH8Q99549 860 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 ZBTB40Q9NUA8 1239 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
RFX3-207ENST00000449190 GOLGB1Q14789 3259 aaKnown RBP11.41□□□□□ -0.58
RFX3-207ENST00000449190 G3V3G9 751 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 SRGAP3O43295 1099 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 UFL1O94874 794 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
RFX3-207ENST00000449190 ATP8B2P98198 1209 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 DCAF8Q5TAQ9 597 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 LDHDQ86WU2 507 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 RPAP2Q8IXW5 612 aaPredicted RBP11.41□□□□□ -0.58
RFX3-207ENST00000449190 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 ANKRD2Q9GZV1 360 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
RFX3-207ENST00000449190 YDJCA8MPS7 323 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 HMMRO75330 724 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 RAD17O75943 681 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 EPS15P42566 896 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
RFX3-207ENST00000449190 LDHAL6AQ6ZMR3 332 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 DBNDD1Q9H9R9 158 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
RFX3-207ENST00000449190 COL4A5P29400 1685 aa11.4□□□□□ -0.59
RFX3-207ENST00000449190 ECE2O60344 883 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 TAF1P21675 1872 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 SCNN1DP51172 638 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
RFX3-207ENST00000449190 USP50Q70EL3 339 aaPredicted RBP11.39□□□□□ -0.59
RFX3-207ENST00000449190 TIAM2Q8IVF5 1701 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 DPF2Q92785 391 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 GPRC5DQ9NZD1 345 aa11.39□□□□□ -0.59
RFX3-207ENST00000449190 VIL1P09327 827 aaKnown RBP11.38□□□□□ -0.59
RFX3-207ENST00000449190 GMPSP49915 693 aaPredicted RBP11.38□□□□□ -0.59
RFX3-207ENST00000449190 CHRNDQ07001 517 aa11.38□□□□□ -0.59
RFX3-207ENST00000449190 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFX3-207ENST00000449190 MTX1Q13505 466 aa11.38□□□□□ -0.59
RFX3-207ENST00000449190 CEP85Q6P2H3 762 aa11.38□□□□□ -0.59
RFX3-207ENST00000449190 PODNQ7Z5L7 613 aa11.38□□□□□ -0.59
RFX3-207ENST00000449190 GPR101Q96P66 508 aaPredicted RBP11.38□□□□□ -0.59
RFX3-207ENST00000449190 ADARB2Q9NS39 739 aaKnown RBP11.38□□□□□ -0.59
RFX3-207ENST00000449190 COL4A1P02462 1669 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 H7C1D1 291 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 PSMD14O00487 310 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 RPS12P25398 132 aaKnown RBP11.37□□□□□ -0.59
RFX3-207ENST00000449190 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
RFX3-207ENST00000449190 ASTLQ6HA08 431 aaPredicted RBP11.37□□□□□ -0.59
RFX3-207ENST00000449190 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
RFX3-207ENST00000449190 COA1Q9GZY4 146 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 CNOT7Q9UIV1 285 aaKnown RBP11.37□□□□□ -0.59
RFX3-207ENST00000449190 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
RFX3-207ENST00000449190 ZNF804BA4D1E1 1349 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 LRRC37AA6NMS7 1700 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 PNMA6EA0A0J9YXQ4 647 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 WTIPA6NIX2 430 aaPredicted RBP11.36□□□□□ -0.59
RFX3-207ENST00000449190 EYA2O00167 538 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 ITGBL1O95965 494 aaPredicted RBP11.36□□□□□ -0.59
RFX3-207ENST00000449190 PTPN12Q05209 780 aaKnown RBP11.36□□□□□ -0.59
RFX3-207ENST00000449190 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 C15orf52Q6ZUT6 534 aaKnown RBP11.36□□□□□ -0.59
RFX3-207ENST00000449190 CNTROBQ8N137 903 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 SSH3Q8TE77 659 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 SIL1Q9H173 461 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 COPRSQ9NQ92 184 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 SCN4AP35499 1836 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 DUOX1Q9NRD9 1551 aa11.36□□□□□ -0.59
RFX3-207ENST00000449190 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 USP17L3A6NCW0 530 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 USP17L4A6NCW7 530 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 CIAO1O76071 339 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 KCNJ4P48050 445 aa11.35□□□□□ -0.59
RFX3-207ENST00000449190 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
RFX3-207ENST00000449190 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms