RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
CHFR-204ENST00000443047 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
CHFR-204ENST00000443047 CCAR2Q8N163 923 aaKnown RBP17.7■□□□□ 0.42
CHFR-204ENST00000443047 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
CHFR-204ENST00000443047 H2AFXP16104 143 aaPredicted RBP17.7■□□□□ 0.42
CHFR-204ENST00000443047 FAM193AP78312 1265 aa17.7■□□□□ 0.42
CHFR-204ENST00000443047 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
CHFR-204ENST00000443047 FMNL2Q96PY5 1086 aa17.7■□□□□ 0.42
CHFR-204ENST00000443047 EPC1Q9H2F5 836 aa17.7■□□□□ 0.42
CHFR-204ENST00000443047 BECN2A8MW95 431 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 ADCK5Q3MIX3 580 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 PRPF40BQ6NWY9 871 aaKnown RBP17.69■□□□□ 0.42
CHFR-204ENST00000443047 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 UBXN4Q92575 508 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 NR1I2O75469 434 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 NOP2P46087 812 aaKnown RBP17.69■□□□□ 0.42
CHFR-204ENST00000443047 GPS2Q13227 327 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 GPATCH11Q8N954 259 aa17.69■□□□□ 0.42
CHFR-204ENST00000443047 TDRD7Q8NHU6 1098 aaKnown RBP17.69■□□□□ 0.42
CHFR-204ENST00000443047 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
CHFR-204ENST00000443047 ZNF335Q9H4Z2 1342 aaPredicted RBP17.68■□□□□ 0.42
CHFR-204ENST00000443047 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 COL18A1P39060 1754 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 A1BGP04217 495 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 SCN11AQ9UI33 1791 aa17.68■□□□□ 0.42
CHFR-204ENST00000443047 A0A087WZG4 1122 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 NBPF26B4DH59 902 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 CASQ1P31415 396 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 LMAN1P49257 510 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 RNF20Q5VTR2 975 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 NBPF10Q6P3W6 841 aaKnown RBP17.67■□□□□ 0.42
CHFR-204ENST00000443047 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 NBPF15Q8N660 670 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 APPP05067 770 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 OAS2P29728 719 aaKnown RBP17.67■□□□□ 0.42
CHFR-204ENST00000443047 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
CHFR-204ENST00000443047 UTYO14607 1347 aa17.67■□□□□ 0.42
CHFR-204ENST00000443047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.67■□□□□ 0.42
CHFR-204ENST00000443047 CEBPZQ03701 1054 aaKnown RBP17.66■□□□□ 0.42
CHFR-204ENST00000443047 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
CHFR-204ENST00000443047 ERC1Q8IUD2 1116 aa17.66■□□□□ 0.42
CHFR-204ENST00000443047 TCEANC2Q96MN5 208 aa17.66■□□□□ 0.42
CHFR-204ENST00000443047 TTC14Q96N46 770 aa17.66■□□□□ 0.42
CHFR-204ENST00000443047 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
CHFR-204ENST00000443047 USP42Q9H9J4 1324 aaKnown RBP17.65■□□□□ 0.42
CHFR-204ENST00000443047 CCZ1BP86790 482 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
CHFR-204ENST00000443047 TFCP2Q12800 502 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 MNS1Q8NEH6 495 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
CHFR-204ENST00000443047 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 A0A0D9SFI3 127 aa17.65■□□□□ 0.42
CHFR-204ENST00000443047 JAKMIP1Q96N16 626 aaKnown RBP17.65■□□□□ 0.42
CHFR-204ENST00000443047 C11orf57Q6ZUT1 292 aaPredicted RBP17.64■□□□□ 0.42
CHFR-204ENST00000443047 FSD1Q9BTV5 496 aa17.64■□□□□ 0.42
CHFR-204ENST00000443047 PDRG1Q9NUG6 133 aa17.64■□□□□ 0.42
CHFR-204ENST00000443047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.64■□□□□ 0.424e-7■■■■□ 20.4
CHFR-204ENST00000443047 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.41
CHFR-204ENST00000443047 NEMFO60524 1076 aa17.64■□□□□ 0.41
CHFR-204ENST00000443047 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
CHFR-204ENST00000443047 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
CHFR-204ENST00000443047 SLAIN2Q9P270 581 aa17.64■□□□□ 0.41
CHFR-204ENST00000443047 DNAI1Q9UI46 699 aa17.64■□□□□ 0.41
CHFR-204ENST00000443047 PTPN12Q05209 780 aaKnown RBP17.64■□□□□ 0.41
CHFR-204ENST00000443047 ICE2Q659A1 982 aa17.64■□□□□ 0.41
CHFR-204ENST00000443047 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
CHFR-204ENST00000443047 FAM177A1Q8N128 213 aaPredicted RBP17.63■□□□□ 0.41
CHFR-204ENST00000443047 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 CLSTN2Q9H4D0 955 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 RRP15Q9Y3B9 282 aaKnown RBP17.63■□□□□ 0.41
CHFR-204ENST00000443047 ANKRD65E5RJM6 399 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 SMC1AQ14683 1233 aaKnown RBP17.63■□□□□ 0.41
CHFR-204ENST00000443047 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
CHFR-204ENST00000443047 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
CHFR-204ENST00000443047 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
CHFR-204ENST00000443047 URI1O94763 535 aaPredicted RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
CHFR-204ENST00000443047 CHRM1P11229 460 aaPredicted RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 RFX5P48382 616 aaPredicted RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 SART3Q15020 963 aaKnown RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 ZNF589Q86UQ0 364 aaPredicted RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 CCDC85AQ96PX6 553 aaPredicted RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 GEMIN8Q9NWZ8 242 aaKnown RBP17.62■□□□□ 0.41
CHFR-204ENST00000443047 WDR17Q8IZU2 1322 aa17.62■□□□□ 0.41
CHFR-204ENST00000443047 DCCP43146 1447 aa17.62■□□□□ 0.41
CHFR-204ENST00000443047 KAT6BQ8WYB5 2073 aa17.61■□□□□ 0.41
CHFR-204ENST00000443047 ME3Q16798 604 aa17.61■□□□□ 0.41
CHFR-204ENST00000443047 RBM8AQ9Y5S9 174 aaKnown RBP17.61■□□□□ 0.41
CHFR-204ENST00000443047 E4F1Q66K89 784 aaPredicted RBP17.61■□□□□ 0.41
CHFR-204ENST00000443047 GOLGA6L1Q8N7Z2 621 aa17.61■□□□□ 0.41
CHFR-204ENST00000443047 DBNDD2Q9BQY9 259 aa17.61■□□□□ 0.41
CHFR-204ENST00000443047 SASH3O75995 380 aa17.61■□□□□ 0.41
CHFR-204ENST00000443047 ZRANB2O95218 330 aaKnown RBP eCLIP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms