RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 NCOA5Q9HCD5 579 aaKnown RBP13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
SEC61A1-202ENST00000424880 ACEP12821 1306 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 PDILTQ8N807 584 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 UBXN6Q9BZV1 441 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 TMEM232C9JQI7 657 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 CHST3Q7LGC8 479 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 AK7Q96M32 723 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 ANO10Q9NW15 660 aa13.1□□□□□ -0.31
SEC61A1-202ENST00000424880 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 GUCY2CP25092 1073 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 ACTN2P35609 894 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 GOLGA5Q8TBA6 731 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 ATRIPQ8WXE1 791 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 CWC15Q9P013 229 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 EIF3CLB5ME19 914 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 POLR3DP05423 398 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 KCNA6P17658 529 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 RESTQ13127 1097 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 EIF3CQ99613 913 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 GJB4Q9NTQ9 266 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 HSPA2P54652 639 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.318e-7■□□□□ 8.4
SEC61A1-202ENST00000424880 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
SEC61A1-202ENST00000424880 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.31
SEC61A1-202ENST00000424880 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 NDUFA8P51970 172 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 GSDMDP57764 484 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 SSH3Q8TE77 659 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 TLR7Q9NYK1 1049 aaKnown RBP13.08□□□□□ -0.32
SEC61A1-202ENST00000424880 EFCAB8A8MWE9 144 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 HAP1P54257 671 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 AACSQ86V21 672 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 SERPINC1P01008 464 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 ADKP55263 362 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 Q6ZUG5 572 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 RPS6KB1P23443 525 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-202ENST00000424880 ADD1P35611 737 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC158Q5M9N0 1113 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 GOLGA6L1Q8N7Z2 621 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 LZTFL1Q9NQ48 299 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 CFAP45Q9UL16 551 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 A0A1B0GUL7 405 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 VWA3AA6NCI4 1184 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 ATP8B1O43520 1251 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 SCRN1Q12765 414 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 FSD1Q9BTV5 496 aa13.06□□□□□ -0.32
SEC61A1-202ENST00000424880 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 GLRX3O76003 335 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 FANCCQ00597 558 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 MTF1Q14872 753 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 PLEKHO1Q53GL0 409 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 PCDHA7Q9UN72 937 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 DHX8Q14562 1220 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 MAP4K1Q92918 833 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 NAT10Q9H0A0 1025 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 AKAP2Q9Y2D5 859 aa13.05□□□□□ -0.32
SEC61A1-202ENST00000424880 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms