RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 A0A087X0B3 334 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 BICDL2A1A5D9 508 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 SRGNP10124 158 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 POLD1P28340 1107 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 RBM10P98175 930 aaKnown RBP7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 APOBRQ0VD83 1088 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 PICALMQ13492 652 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 PUS10Q3MIT2 529 aaKnown RBP7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 CCDC93Q567U6 631 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 PI16Q6UXB8 463 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 PODNQ7Z5L7 613 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 TNS4Q8IZW8 715 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 ZNF296Q8WUU4 475 aaPredicted RBP7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 ERP27Q96DN0 273 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 SHDQ96IW2 340 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 NOC4LQ9BVI4 516 aaKnown RBP7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 SELENOOQ9BVL4 669 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 POLG2Q9UHN1 485 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 USP25Q9UHP3 1055 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 RABGAP1Q9Y3P9 1069 aa7.23□□□□□ -1.25
CBX1P3-201ENST00000413296 MINDY4BA8MYZ0 360 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 IRS4O14654 1257 aaPredicted RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 DHX16O60231 1041 aaKnown RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 PDE8AO60658 829 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 TRIM27P14373 513 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 HTR3AP46098 478 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 NEK3P51956 506 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 ATN1P54259 1190 aaPredicted RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 GEMIN4P57678 1058 aaKnown RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 CCDC96Q2M329 555 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 IER5LQ5T953 404 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 PCNX4Q63HM2 1172 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 IL31Q6EBC2 164 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 MORC1Q86VD1 984 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 PASD1Q8IV76 773 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 TTC30BQ8N4P2 665 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 MAGEB6Q8N7X4 407 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 SMAD5Q99717 465 aaKnown RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 TSPAN10Q9H1Z9 355 aaPredicted RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 AASDHPPTQ9NRN7 309 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 ACTR10Q9NZ32 417 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 PUF60Q9UHX1 559 aaKnown RBP7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 NUB1Q9Y5A7 615 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 CUX2O14529 1486 aa7.22□□□□□ -1.25
CBX1P3-201ENST00000413296 A0A1W2PRU2 124 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 ATMINO43313 823 aaPredicted RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 HALP42357 657 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 AKAP4Q5JQC9 854 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 PERM1Q5SV97 790 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 MORN1Q5T089 497 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 RNF180Q86T96 592 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 ZNF354CQ86Y25 554 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 SUGP1Q8IWZ8 645 aaKnown RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 PPHLN1Q8NEY8 458 aaKnown RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 HOOK2Q96ED9 719 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 GPR101Q96P66 508 aaPredicted RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 RTFDC1Q9BY42 306 aaPredicted RBP7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 HDAC9Q9UKV0 1011 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 LRFN2Q9ULH4 789 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 SLC27A5Q9Y2P5 690 aa7.21□□□□□ -1.26
CBX1P3-201ENST00000413296 RASSF10A6NK89 507 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 TMEM229AB2RXF0 380 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 HAX1O00165 279 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 BACH1O14867 736 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 PRPF3O43395 683 aaKnown RBP7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 DIAPH1O60610 1272 aaKnown RBP7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 PCSK2P16519 638 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 RRM1P23921 792 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 SEPT6Q14141 434 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 LONRF1Q17RB8 773 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 ASTLQ6HA08 431 aaPredicted RBP7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 CASC1Q6TDU7 716 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 AFAP1L2Q8N4X5 818 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 ZSWIM2Q8NEG5 633 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 RIN3Q8TB24 985 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 MYO19Q96H55 970 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 CAMKK2Q96RR4 588 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 USB1Q9BQ65 265 aaKnown RBP7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 OBP2AQ9NY56 170 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 CLIC5Q9NZA1 410 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 AKAP2Q9Y2D5 859 aa7.2□□□□□ -1.26
CBX1P3-201ENST00000413296 F6X3S4 739 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 MYCP01106 439 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 CT47B1P0C2W7 299 aaPredicted RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 CPEP16870 476 aa7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 HDGFP51858 240 aaKnown RBP7.19□□□□□ -1.26
CBX1P3-201ENST00000413296 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms