RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CANXP27824 592 aaKnown RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 ERCC5P28715 1186 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 RASSF7Q02833 373 aa6.72□□□□□ -1.33
BRCA1-204ENST00000412061 MLLT1Q03111 559 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 TMEM151AQ8N4L1 468 aa6.72□□□□□ -1.33
BRCA1-204ENST00000412061 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
BRCA1-204ENST00000412061 PPP1R1BQ9UD71 204 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 USP31Q70CQ4 1352 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 GDF11O95390 407 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 ARAFP10398 606 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 XRCC5P13010 732 aaKnown RBP6.71□□□□□ -1.34
BRCA1-204ENST00000412061 ACPPP15309 386 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 MAP2K3P46734 347 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
BRCA1-204ENST00000412061 PCBP4P57723 403 aaKnown RBP6.71□□□□□ -1.34
BRCA1-204ENST00000412061 GAS6Q14393 721 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 TNFRSF25Q93038 417 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 MBIPQ9NS73 344 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 ADAMTS8Q9UP79 889 aa6.71□□□□□ -1.34
BRCA1-204ENST00000412061 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 J3QW42 95 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 ADH6P28332 368 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 FCGRTP55899 365 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
BRCA1-204ENST00000412061 RNFT1Q5M7Z0 435 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 MEI1Q5TIA1 1274 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 C9orf131Q5VYM1 1079 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 METTL16Q86W50 562 aaKnown RBP6.7□□□□□ -1.34
BRCA1-204ENST00000412061 NT5DC4Q86YG4 428 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 CCNJLQ8IV13 435 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 TMEM102Q8N9M5 508 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-204ENST00000412061 TCF12Q99081 682 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 OXCT2Q9BYC2 517 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-204ENST00000412061 ZFYVE1Q9HBF4 777 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 ABCB6Q9NP58 842 aa6.7□□□□□ -1.34
BRCA1-204ENST00000412061 EIF2AK2P19525 551 aaKnown RBP6.69□□□□□ -1.34
BRCA1-204ENST00000412061 ZNF385CQ66K41 422 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-204ENST00000412061 DTHD1Q6ZMT9 781 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 C3orf58Q8NDZ4 430 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 COL25A1Q9BXS0 654 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-204ENST00000412061 PBX4Q9BYU1 374 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 BHLHE41Q9C0J9 482 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-204ENST00000412061 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 SLC6A14Q9UN76 642 aa6.69□□□□□ -1.34
BRCA1-204ENST00000412061 TTF2Q9UNY4 1162 aaKnown RBP6.69□□□□□ -1.34
BRCA1-204ENST00000412061 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 NFKBIEO00221 500 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 PDE2AO00408 941 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-204ENST00000412061 TRPA1O75762 1119 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 SMNDC1O75940 238 aaKnown RBP eCLIP6.68□□□□□ -1.34
BRCA1-204ENST00000412061 ADH7P40394 386 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 ATP11AP98196 1134 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 HS2ST1Q7LGA3 356 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 FAM35AQ86V20 835 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 WHAMMQ8TF30 809 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
BRCA1-204ENST00000412061 NEURL1BA8MQ27 555 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 CPB1P15086 417 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 GRIA4P48058 902 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 PTPN12Q05209 780 aaKnown RBP6.67□□□□□ -1.34
BRCA1-204ENST00000412061 RAD51AP2Q09MP3 1159 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 NAALADL2Q58DX5 795 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 MICALL1Q8N3F8 863 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 ANKRD24Q8TF21 1146 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 UBXN4Q92575 508 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 HHIPQ96QV1 700 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 TGIF2Q9GZN2 237 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 KLF15Q9UIH9 416 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 TTBK1Q5TCY1 1321 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-204ENST00000412061 IGF1RP08069 1367 aa6.67□□□□□ -1.34
BRCA1-204ENST00000412061 A0A096LPE4 126 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 A0A1W2PPZ6 126 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 ITPKAP23677 461 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 CEP135Q66GS9 1140 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 ELMSAN1Q6PJG2 1045 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 GOLGA6L1Q8N7Z2 621 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 ASAP3Q8TDY4 903 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 PLD4Q96BZ4 506 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
BRCA1-204ENST00000412061 CCSER2Q9H7U1 834 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 GGT7Q9UJ14 662 aa6.66□□□□□ -1.34
BRCA1-204ENST00000412061 GDF2Q9UK05 429 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-204ENST00000412061 ELOA3CA0A087WX78 387 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-204ENST00000412061 ELOA3DA6NLF2 546 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-204ENST00000412061 METTL12A8MUP2 240 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 ALAS2P22557 587 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 SPRED3Q2MJR0 410 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 ELOA3BQ3SY89 546 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 PERM1Q5SV97 790 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 FCHSD1Q86WN1 690 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 ELOA3Q8NG57 546 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 MDFIQ99750 246 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 FRRS1LQ9P0K9 344 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms