RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 ZC3H6P61129 1189 aaKnown RBP8.17□□□□□ -1.1
LSM5-206ENST00000409987 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
LSM5-206ENST00000409987 PCSK7Q16549 785 aa8.17□□□□□ -1.1
LSM5-206ENST00000409987 SPRED3Q2MJR0 410 aa8.17□□□□□ -1.1
LSM5-206ENST00000409987 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
LSM5-206ENST00000409987 FCHSD1Q86WN1 690 aa8.17□□□□□ -1.1
LSM5-206ENST00000409987 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
LSM5-206ENST00000409987 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
LSM5-206ENST00000409987 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 PDE2AO00408 941 aaPredicted RBP8.16□□□□□ -1.1
LSM5-206ENST00000409987 IGSF3O75054 1194 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 GHRHP01286 108 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 XRCC5P13010 732 aaKnown RBP8.16□□□□□ -1.1
LSM5-206ENST00000409987 CPB1P15086 417 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 EIF2AK2P19525 551 aaKnown RBP8.16□□□□□ -1.1
LSM5-206ENST00000409987 ADH6P28332 368 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 ADH7P40394 386 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 MAP2K3P46734 347 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 DTHD1Q6ZMT9 781 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 TGIF2Q9GZN2 237 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 AKAP2Q9Y2D5 859 aa8.16□□□□□ -1.1
LSM5-206ENST00000409987 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 ITPKAP23677 461 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 ZNF394Q53GI3 561 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 PERM1Q5SV97 790 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 HS2ST1Q7LGA3 356 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 ANKRD24Q8TF21 1146 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 POP1Q99575 1024 aaKnown RBP8.15□□□□□ -1.1
LSM5-206ENST00000409987 COL25A1Q9BXS0 654 aaPredicted RBP8.15□□□□□ -1.1
LSM5-206ENST00000409987 GGT7Q9UJ14 662 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 PPM1HQ9ULR3 514 aa8.15□□□□□ -1.1
LSM5-206ENST00000409987 IGF1RP08069 1367 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 ERBB4Q15303 1308 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 A0A096LPE4 126 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 FBXO24O75426 580 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 ADAMTSL4Q6UY14 1074 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 ERMP1Q7Z2K6 904 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 RBSNQ9H1K0 784 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
LSM5-206ENST00000409987 GGA1Q9UJY5 639 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
LSM5-206ENST00000409987 PCDHGB7Q9Y5F8 929 aa8.14□□□□□ -1.11
LSM5-206ENST00000409987 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 RACK1P63244 317 aaKnown RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 CEP135Q66GS9 1140 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 LPIN3Q9BQK8 851 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 SMG9Q9H0W8 520 aaKnown RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 MUC3BQ9H195 1237 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 ZNF576Q9H609 170 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 SRA1Q9HD15 236 aaKnown RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 COPRSQ9NQ92 184 aa8.13□□□□□ -1.11
LSM5-206ENST00000409987 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.13□□□□□ -1.11
LSM5-206ENST00000409987 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
LSM5-206ENST00000409987 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
LSM5-206ENST00000409987 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
LSM5-206ENST00000409987 KRT76Q01546 638 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
LSM5-206ENST00000409987 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 TRIM56Q9BRZ2 755 aaKnown RBP8.12□□□□□ -1.11
LSM5-206ENST00000409987 TRIM33Q9UPN9 1127 aa8.12□□□□□ -1.11
LSM5-206ENST00000409987 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
LSM5-206ENST00000409987 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
LSM5-206ENST00000409987 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
LSM5-206ENST00000409987 TINF2Q9BSI4 451 aa8.11□□□□□ -1.11
LSM5-206ENST00000409987 ZFYVE1Q9HBF4 777 aa8.11□□□□□ -1.11
LSM5-206ENST00000409987 FRRS1LQ9P0K9 344 aa8.11□□□□□ -1.11
LSM5-206ENST00000409987 CELA3AP09093 270 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 TNNI2P48788 182 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 SLCO4C1Q6ZQN7 724 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 ZNF654Q8IZM8 581 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 MICALL1Q8N3F8 863 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 GOLGA6L1Q8N7Z2 621 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 BSNDQ8WZ55 320 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 ADAM19Q9H013 955 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 SEC31BQ9NQW1 1179 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 KBTBD4Q9NVX7 518 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 STARD13Q9Y3M8 1113 aa8.1□□□□□ -1.11
LSM5-206ENST00000409987 F6X3S4 739 aa8.09□□□□□ -1.11
LSM5-206ENST00000409987 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
LSM5-206ENST00000409987 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
LSM5-206ENST00000409987 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
LSM5-206ENST00000409987 SV2BQ7L1I2 683 aa8.09□□□□□ -1.11
LSM5-206ENST00000409987 SLC16A10Q8TF71 515 aa8.09□□□□□ -1.11
LSM5-206ENST00000409987 NECAB3Q96P71 396 aaPredicted RBP8.09□□□□□ -1.11
LSM5-206ENST00000409987 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
LSM5-206ENST00000409987 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms