RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PPFIA1Q13136 1202 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 SELENOOQ9BVL4 669 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 RAB34Q9BZG1 259 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 SSH2Q76I76 1423 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 SSR1P43307 286 aaKnown RBP20.07■□□□□ 0.8
SMPD4-202ENST00000409031 CLNS1AP54105 237 aaKnown RBP20.07■□□□□ 0.8
SMPD4-202ENST00000409031 METTL24Q5JXM2 366 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 PAXIP1Q6ZW49 1069 aaPredicted RBP20.07■□□□□ 0.8
SMPD4-202ENST00000409031 IQCA1Q86XH1 822 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
SMPD4-202ENST00000409031 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 ZBTB43O43298 467 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 TCP11L1Q9NUJ3 509 aa20.07■□□□□ 0.8
SMPD4-202ENST00000409031 PSMA7O14818 248 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 NLRP5P59047 1200 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
SMPD4-202ENST00000409031 RAB11FIP4Q86YS3 637 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 FBF1Q8TES7 1133 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 STMN4Q9H169 189 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-202ENST00000409031 ZFYP08048 801 aaPredicted RBP20.06■□□□□ 0.8
SMPD4-202ENST00000409031 NLRP12P59046 1061 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 CCDC122Q5T0U0 273 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 BANK1Q8NDB2 785 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 RBM28Q9NW13 759 aaKnown RBP20.06■□□□□ 0.8
SMPD4-202ENST00000409031 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 XPO4Q9C0E2 1151 aaKnown RBP20.06■□□□□ 0.8
SMPD4-202ENST00000409031 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 KIF24Q5T7B8 1368 aa20.06■□□□□ 0.8
SMPD4-202ENST00000409031 CCDC6Q16204 474 aa20.05■□□□□ 0.8
SMPD4-202ENST00000409031 GOLGA6BA6NDN3 693 aa20.05■□□□□ 0.8
SMPD4-202ENST00000409031 RRP15Q9Y3B9 282 aaKnown RBP20.05■□□□□ 0.8
SMPD4-202ENST00000409031 MAP3K12Q12852 859 aa20.05■□□□□ 0.8
SMPD4-202ENST00000409031 TDRD7Q8NHU6 1098 aaKnown RBP20.05■□□□□ 0.8
SMPD4-202ENST00000409031 KIAA0753Q2KHM9 967 aa20.05■□□□□ 0.8
SMPD4-202ENST00000409031 AMOTQ4VCS5 1084 aa20.05■□□□□ 0.8
SMPD4-202ENST00000409031 DDX41Q9UJV9 622 aaKnown RBP20.05■□□□□ 0.8
SMPD4-202ENST00000409031 TRIM14Q14142 442 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 CDC37L1Q7L3B6 337 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 MED4Q9NPJ6 270 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
SMPD4-202ENST00000409031 CDC25BP30305 580 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 APOBRQ0VD83 1088 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 CCDC40Q4G0X9 1142 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 C6orf163Q5TEZ5 329 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 CCDC144CPQ8IYA2 1237 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 MSH6P52701 1360 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 FMNL3Q8IVF7 1028 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 A0A087WZG4 1122 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 MTMR6Q9Y217 621 aa20.04■□□□□ 0.8
SMPD4-202ENST00000409031 KIF4AO95239 1232 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 CATIPQ7Z7H3 387 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 ACTN2P35609 894 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 PRPF4BQ13523 1007 aaKnown RBP20.03■□□□□ 0.8
SMPD4-202ENST00000409031 UBE4AQ14139 1066 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-202ENST00000409031 NAA16Q6N069 864 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-202ENST00000409031 RABGGTAQ92696 567 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 SPTLC3Q9NUV7 552 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 SAMD15Q9P1V8 674 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 TMTC1Q8IUR5 882 aa20.03■□□□□ 0.8
SMPD4-202ENST00000409031 STX17P56962 302 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 UBXN1Q04323 297 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 CUL4AQ13619 759 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 KRI1Q8N9T8 703 aaKnown RBP20.02■□□□□ 0.8
SMPD4-202ENST00000409031 MLKLQ8NB16 471 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 TTC14Q96N46 770 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 IFT81Q8WYA0 676 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 DHX58Q96C10 678 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 CHAMP1Q96JM3 812 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 RPGRIP1Q96KN7 1286 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 TSGA10Q9BZW7 698 aa20.02■□□□□ 0.8
SMPD4-202ENST00000409031 CTDP1Q9Y5B0 961 aaPredicted RBP20.02■□□□□ 0.8
SMPD4-202ENST00000409031 ATP2B3Q16720 1220 aa20.02■□□□□ 0.79
SMPD4-202ENST00000409031 FAM71BQ8TC56 605 aa20.02■□□□□ 0.79
SMPD4-202ENST00000409031 RGS12O14924 1447 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 TRIM75PA6NK02 468 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 TNNC1P63316 161 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 TMEM266Q2M3C6 531 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 EXOC4Q96A65 974 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 SLC27A2O14975 620 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 PRC1O43663 620 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 TTF1Q15361 905 aaPredicted RBP20.01■□□□□ 0.79
SMPD4-202ENST00000409031 CYP26C1Q6V0L0 522 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 SPATS2Q86XZ4 545 aaKnown RBP20.01■□□□□ 0.79
SMPD4-202ENST00000409031 HNRNPH2P55795 449 aaKnown RBP20.01■□□□□ 0.79
SMPD4-202ENST00000409031 LACTBP83111 547 aaPredicted RBP20.01■□□□□ 0.79
SMPD4-202ENST00000409031 IKQ13123 557 aaPredicted RBP20.01■□□□□ 0.79
SMPD4-202ENST00000409031 TMTC2Q8N394 836 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 CALML4Q96GE6 196 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 ZNF202O95125 648 aa20.01■□□□□ 0.79
SMPD4-202ENST00000409031 IDEP14735 1019 aa20■□□□□ 0.79
SMPD4-202ENST00000409031 ANO1Q5XXA6 986 aa20■□□□□ 0.79
SMPD4-202ENST00000409031 FAM69CQ0P6D2 419 aa20■□□□□ 0.79
SMPD4-202ENST00000409031 CACTINQ8WUQ7 758 aaKnown RBP20■□□□□ 0.79
SMPD4-202ENST00000409031 NCBP1Q09161 790 aaKnown RBP20■□□□□ 0.79
SMPD4-202ENST00000409031 CLEC17AQ6ZS10 378 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms