RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 IL17RAQ96F46 866 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
HPS4-203ENST00000402105 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 ORC3Q9UBD5 711 aaPredicted RBP10.67□□□□□ -0.7
HPS4-203ENST00000402105 GOLGA8BA8MQT2 603 aa10.67□□□□□ -0.7
HPS4-203ENST00000402105 KLF18A0A0U1RQI7 1052 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 CTAGE5O15320 804 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 CCZ1BP86790 482 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 CCZ1P86791 482 aaPredicted RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 CCDC34Q96HJ3 373 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 ZBTB3Q9H5J0 574 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 NRKQ7Z2Y5 1582 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 E7EWF7 191 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 CTDNEP1O95476 244 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 MTX1Q13505 466 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 SKIDA1Q1XH10 827 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 NOL10Q9BSC4 688 aaKnown RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 TAF7LQ5H9L4 462 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 RALYLQ86SE5 291 aaKnown RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 ERO1AQ96HE7 468 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 MRFAP1L1Q96HT8 127 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 ZNF496Q96IT1 587 aaPredicted RBP10.66□□□□□ -0.7
HPS4-203ENST00000402105 AIFM3Q96NN9 605 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 TSPOAP1O95153 1857 aa10.66□□□□□ -0.7
HPS4-203ENST00000402105 TEX35Q5T0J7 233 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 ORAI2Q96SN7 254 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 RCOR1Q9UKL0 485 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
HPS4-203ENST00000402105 GCP02774 474 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
HPS4-203ENST00000402105 PTPN12Q05209 780 aaKnown RBP10.65□□□□□ -0.7
HPS4-203ENST00000402105 PPP1R13BQ96KQ4 1090 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 BABAM1Q9NWV8 329 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 COL15A1P39059 1388 aa10.65□□□□□ -0.7
HPS4-203ENST00000402105 A0A0G2JS52 829 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 SPTLC2O15270 562 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 NEMFO60524 1076 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 ATP5JP18859 108 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 UBASH3AP57075 661 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 TERF2Q15554 542 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 ZNF790Q6PG37 636 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 CPLX3Q8WVH0 158 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 KCNB2Q92953 911 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 CARD6Q9BX69 1037 aa10.65□□□□□ -0.71
HPS4-203ENST00000402105 PFKFB2O60825 505 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 ZNF202O95125 648 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 SLFN14P0C7P3 912 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 PDIA4P13667 645 aaKnown RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 ZCCHC17Q9NP64 241 aaKnown RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 GSDMDP57764 484 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 LRRC24Q50LG9 513 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 ARMCX5Q6P1M9 558 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 TMCO3Q6UWJ1 677 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 NPHP4O75161 1426 aaPredicted RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 HOXB7P09629 217 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 HSPD1P10809 573 aaKnown RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 ADD1P35611 737 aaKnown RBP10.64□□□□□ -0.71
HPS4-203ENST00000402105 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
HPS4-203ENST00000402105 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 CAVIN2O95810 425 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 GYS2P54840 703 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 GNG11P61952 73 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 FANCCQ00597 558 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 PNOCQ13519 176 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 CHRNA2Q15822 529 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 KBTBD3Q8NAB2 608 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 PHKBQ93100 1093 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 MYL10Q9BUA6 226 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 KARSQ15046 597 aaKnown RBP10.63□□□□□ -0.71
HPS4-203ENST00000402105 PI16Q6UXB8 463 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 NEK11Q8NG66 645 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 CABLES1Q8TDN4 633 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 MORC2Q9Y6X9 1032 aaPredicted RBP10.63□□□□□ -0.71
HPS4-203ENST00000402105 ZNF609O15014 1411 aa10.63□□□□□ -0.71
HPS4-203ENST00000402105 CCDC66A2RUB6 948 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 PRC1O43663 620 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 TOP1P11387 765 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 CLCN6P51797 869 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 BMS1Q14692 1282 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 DPF2Q92785 391 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 PUS3Q9BZE2 481 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 ADAMTS13Q76LX8 1427 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 HMGB1P09429 215 aaKnown RBP10.62□□□□□ -0.71
HPS4-203ENST00000402105 SYKP43405 635 aa10.62□□□□□ -0.71
HPS4-203ENST00000402105 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms