RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 CNNM1Q9NRU3 951 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 M0R2C6 588 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 GTF3C6Q969F1 213 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 SYAP1Q96A49 352 aaPredicted RBP18.69■□□□□ 0.58
CDC42-203ENST00000400259 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 CNPY2Q9Y2B0 182 aa18.69■□□□□ 0.58
CDC42-203ENST00000400259 LRSAM1Q6UWE0 723 aa18.68■□□□□ 0.58
CDC42-203ENST00000400259 Q6ZUG5 572 aa18.68■□□□□ 0.58
CDC42-203ENST00000400259 DHX32Q7L7V1 743 aaKnown RBP18.68■□□□□ 0.58
CDC42-203ENST00000400259 CASZ1Q86V15 1759 aa18.68■□□□□ 0.58
CDC42-203ENST00000400259 ATRNO75882 1429 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 PDE8BO95263 885 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 ZAP70P43403 619 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
CDC42-203ENST00000400259 ITPK1Q13572 414 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 SMARCC1Q92922 1105 aaPredicted RBP18.67■□□□□ 0.58
CDC42-203ENST00000400259 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 GADD45BO75293 160 aaPredicted RBP18.67■□□□□ 0.58
CDC42-203ENST00000400259 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
CDC42-203ENST00000400259 CSPP1Q1MSJ5 1256 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
CDC42-203ENST00000400259 APPBP2Q92624 585 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 MYH15Q9Y2K3 1946 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 RTL9Q8NET4 1388 aa18.67■□□□□ 0.58
CDC42-203ENST00000400259 MROH5Q6ZUA9 1318 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
CDC42-203ENST00000400259 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
CDC42-203ENST00000400259 NUTM2BA6NNL0 878 aaPredicted RBP18.66■□□□□ 0.58
CDC42-203ENST00000400259 NUTM2EB1AL46 878 aaPredicted RBP18.66■□□□□ 0.58
CDC42-203ENST00000400259 TOM1O60784 492 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 DTNBO60941 627 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 MCAMP43121 646 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 UBE2HP62256 183 aa18.66■□□□□ 0.58
CDC42-203ENST00000400259 NUTM2AQ8IVF1 878 aaPredicted RBP18.66■□□□□ 0.58
CDC42-203ENST00000400259 E7EWF7 191 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 FOXP2O15409 715 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 FGFR2P21802 821 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 FBXL16Q8N461 479 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
CDC42-203ENST00000400259 CTNNA3Q9UI47 895 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 A0A1B0GUL6 1792 aa18.65■□□□□ 0.58
CDC42-203ENST00000400259 VPS37CA5D8V6 355 aaPredicted RBP18.65■□□□□ 0.58
CDC42-203ENST00000400259 ARID4AP29374 1257 aaPredicted RBP18.65■□□□□ 0.58
CDC42-203ENST00000400259 TTF1Q15361 905 aaPredicted RBP18.65■□□□□ 0.58
CDC42-203ENST00000400259 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDC42-203ENST00000400259 SYCE3A1L190 88 aa18.64■□□□□ 0.57
CDC42-203ENST00000400259 PHF14O94880 888 aa18.64■□□□□ 0.57
CDC42-203ENST00000400259 PUM3Q15397 648 aaKnown RBP18.64■□□□□ 0.57
CDC42-203ENST00000400259 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
CDC42-203ENST00000400259 PPP1R9BQ96SB3 815 aa18.64■□□□□ 0.57
CDC42-203ENST00000400259 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.57
CDC42-203ENST00000400259 PFKFB2O60825 505 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
CDC42-203ENST00000400259 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 LPIN2Q92539 896 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 RBSNQ9H1K0 784 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 UQCRFS1P1P0C7P4 283 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 BRF1Q92994 677 aa18.63■□□□□ 0.57
CDC42-203ENST00000400259 NTSR2O95665 410 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 DNM1Q05193 864 aaKnown RBP18.62■□□□□ 0.57
CDC42-203ENST00000400259 STK3Q13188 491 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 WASHC4Q2M389 1173 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 ADD2P35612 726 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 BCL9LQ86UU0 1499 aa18.62■□□□□ 0.57
CDC42-203ENST00000400259 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 CCDC102BQ68D86 513 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 PUS7LQ9H0K6 701 aaKnown RBP18.61■□□□□ 0.57
CDC42-203ENST00000400259 A0A0G2JS52 829 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 RGL2O15211 777 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 FIBPO43427 364 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
CDC42-203ENST00000400259 SCRN1Q12765 414 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 ELP1O95163 1332 aa18.61■□□□□ 0.57
CDC42-203ENST00000400259 EVCP57679 992 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 UBE3CQ15386 1083 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 VPS72Q15906 364 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 IMMTQ16891 758 aaKnown RBP18.6■□□□□ 0.57
CDC42-203ENST00000400259 TTLL5Q6EMB2 1281 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
CDC42-203ENST00000400259 CHD4Q14839 1912 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 GPAA1O43292 621 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 PHKA1P46020 1223 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 KRT85P78386 507 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 FGD1P98174 961 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 CCDC183Q5T5S1 534 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 CLEC4GQ6UXB4 293 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 ZNF274Q96GC6 653 aaPredicted RBP18.6■□□□□ 0.57
CDC42-203ENST00000400259 LRRC2Q9BYS8 371 aa18.6■□□□□ 0.57
CDC42-203ENST00000400259 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms