RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 GGA1Q9UJY5 639 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 ZNRF3Q9ULT6 936 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 SRGAP3O43295 1099 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 ITGA6P23229 1130 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 LMOD1P29536 600 aaPredicted RBP10.49□□□□□ -0.73
HERC4-203ENST00000395185 GPSM2P81274 684 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
HERC4-203ENST00000395185 KIAA2012Q0VF49 1180 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 GSE1Q14687 1217 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 AOC3Q16853 763 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 LMBR1LQ6UX01 489 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 GPC2Q8N158 579 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
HERC4-203ENST00000395185 ANKRD2Q9GZV1 360 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 GREM2Q9H772 168 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 GJA3Q9Y6H8 435 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 RTL9Q8NET4 1388 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 NUP98P52948 1817 aa10.49□□□□□ -0.73
HERC4-203ENST00000395185 BCORQ6W2J9 1755 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 RAB11FIP3O75154 756 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 FSTL1Q12841 308 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 TBC1D16Q8TBP0 767 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 HACL1Q9UJ83 578 aa10.48□□□□□ -0.73
HERC4-203ENST00000395185 AFDNP55196 1824 aaKnown RBP10.48□□□□□ -0.73
HERC4-203ENST00000395185 UFL1O94874 794 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 KCNJ4P48050 445 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 CIAPIN1Q6FI81 312 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 PNMA8AQ86V59 439 aaPredicted RBP10.47□□□□□ -0.73
HERC4-203ENST00000395185 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 POLLQ9UGP5 575 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 MINPP1Q9UNW1 487 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 LEMD3Q9Y2U8 911 aa10.47□□□□□ -0.73
HERC4-203ENST00000395185 SURF6O75683 361 aaKnown RBP10.46□□□□□ -0.73
HERC4-203ENST00000395185 CIAO1O76071 339 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 PDE4AP27815 886 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 CXCL9Q07325 125 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 HSP90AB4PQ58FF6 505 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 LDHAL6AQ6ZMR3 332 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 L3MBTL3Q96JM7 780 aaPredicted RBP10.46□□□□□ -0.73
HERC4-203ENST00000395185 CNNM1Q9NRU3 951 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 XDHP47989 1333 aa10.46□□□□□ -0.73
HERC4-203ENST00000395185 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 H7C1D1 291 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 SASH1O94885 1247 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 EPHX2P34913 555 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 ANKRD45Q5TZF3 282 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 TAF1DQ9H5J8 278 aaPredicted RBP10.45□□□□□ -0.74
HERC4-203ENST00000395185 PA2G4Q9UQ80 394 aaKnown RBP10.45□□□□□ -0.74
HERC4-203ENST00000395185 EXOC6BQ9Y2D4 811 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 RIPOR2Q9Y4F9 1068 aa10.45□□□□□ -0.74
HERC4-203ENST00000395185 KIAA1551Q9HCM1 1747 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 ZNF541Q9H0D2 1346 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 EYA2O00167 538 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 RAD17O75943 681 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 HSPA6P17066 643 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 DOK7Q18PE1 504 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
HERC4-203ENST00000395185 PODNQ7Z5L7 613 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 LDHDQ86WU2 507 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 RHPN1Q8TCX5 695 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 KIF1BPQ96EK5 621 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 CHD4Q14839 1912 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 ANKRD36CQ5JPF3 1778 aa10.44□□□□□ -0.74
HERC4-203ENST00000395185 SLX4Q8IY92 1834 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 POTECB2RU33 542 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 ECE2O60344 883 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 APLP1P51693 650 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
HERC4-203ENST00000395185 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 ERC1Q8IUD2 1116 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 KLHDC4Q8TBB5 520 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 LRRCC1Q9C099 1032 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 DBNDD1Q9H9R9 158 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 GPR108Q9NPR9 543 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 STAP2Q9UGK3 403 aa10.43□□□□□ -0.74
HERC4-203ENST00000395185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.43□□□□□ -0.74
HERC4-203ENST00000395185 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 RPS12P25398 132 aaKnown RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 IL15P40933 162 aaPredicted RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 CHRNDQ07001 517 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 G3BP1Q13283 466 aaKnown RBP eCLIP10.42□□□□□ -0.74
HERC4-203ENST00000395185 PLEKHM2Q8IWE5 1019 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 DPF2Q92785 391 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 ZNF594Q96JF6 807 aaPredicted RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 PUS3Q9BZE2 481 aaKnown RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 LNPKQ9C0E8 428 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 COA1Q9GZY4 146 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 ADARB2Q9NS39 739 aaKnown RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 CIZ1Q9ULV3 898 aaPredicted RBP10.42□□□□□ -0.74
HERC4-203ENST00000395185 ANKRD31Q8N7Z5 1873 aa10.42□□□□□ -0.74
HERC4-203ENST00000395185 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
HERC4-203ENST00000395185 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms