RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 COL18A1P39060 1754 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 C11orf57Q6ZUT1 292 aaPredicted RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 NGLY1Q96IV0 654 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 DRC1Q96MC2 740 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 RAI14Q9P0K7 980 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 PAXBP1Q9Y5B6 917 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 CAMTA1Q9Y6Y1 1673 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 GLRX3O76003 335 aaKnown RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 CAPN2P17655 700 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 IL13P35225 146 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 MTHFSDQ2M296 383 aaKnown RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 CAGE1Q8TC20 777 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 TSPYL1Q9H0U9 437 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 COL3A1P02461 1466 aaPredicted RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 OLFM4Q6UX06 510 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 Q6ZUG5 572 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 DESI2Q9BSY9 194 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 TPCN1Q9ULQ1 816 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 CHGBP05060 677 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 MATR3P43243 847 aaKnown RBP eCLIP10.25□□□□□ -0.772e-7■■□□□ 13.8
RTN4-206ENST00000394611 KIF4BQ2VIQ3 1234 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 AK7Q96M32 723 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 FEZ1Q99689 392 aa10.25□□□□□ -0.77
RTN4-206ENST00000394611 DDX19AQ9NUU7 478 aaKnown RBP10.25□□□□□ -0.77
RTN4-206ENST00000394611 COBLO75128 1261 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 NAP1L1P55209 391 aaKnown RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 EVCP57679 992 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 IRX5P78411 483 aaPredicted RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 CFAP45Q9UL16 551 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 RTL1A6NKG5 1358 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 HNRNPH2P55795 449 aaKnown RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 STX17P56962 302 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 EVA1CP58658 441 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 CREB3L3Q68CJ9 461 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 ANO10Q9NW15 660 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 RAD50Q92878 1312 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 RGPD2P0DJD1 1756 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 E2F4Q16254 413 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 LEO1Q8WVC0 666 aaPredicted RBP10.24□□□□□ -0.77
RTN4-206ENST00000394611 GJB4Q9NTQ9 266 aa10.24□□□□□ -0.77
RTN4-206ENST00000394611 ATP2C2O75185 946 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 NEXNQ0ZGT2 675 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 STX1AQ16623 288 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 EYA1Q99502 592 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 ECHDC1Q9NTX5 307 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 C1orf141Q5JVX7 400 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 INTS4Q96HW7 963 aaKnown RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 NLRP2Q9NX02 1062 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 ERBB3P21860 1342 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 IL16Q14005 1332 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 LMO7Q8WWI1 1683 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 GOLIM4O00461 696 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 SLC3A2P08195 630 aaKnown RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 OAS2P29728 719 aaKnown RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 GTF2A1P52655 376 aaPredicted RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 IRX3P78415 501 aaPredicted RBP10.23□□□□□ -0.77
RTN4-206ENST00000394611 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
RTN4-206ENST00000394611 CYP2E1P05181 493 aaPredicted RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 CASQ1P31415 396 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 UBASH3AP57075 661 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 TAF3Q5VWG9 929 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 ABCC4O15439 1325 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 SOS1Q07889 1333 aaPredicted RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 KIF24Q5T7B8 1368 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 COL14A1Q05707 1796 aaKnown RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 TRIM66O15016 1216 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 XPO4Q9C0E2 1151 aaKnown RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 PLCH1Q4KWH8 1693 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 COL5A2P05997 1499 aaPredicted RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 SGSM2O43147 1006 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 ATP8B2P98198 1209 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 TRIM29Q14134 588 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 TOM1L2Q6ZVM7 507 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 MAP3K2Q9Y2U5 619 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 ENOX2Q16206 610 aaKnown RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 TRMT44Q8IYL2 757 aaKnown RBP10.22□□□□□ -0.77
RTN4-206ENST00000394611 EEF2KMTQ96G04 330 aa10.22□□□□□ -0.77
RTN4-206ENST00000394611 ERCC3P19447 782 aa10.21□□□□□ -0.77
RTN4-206ENST00000394611 PDE6BP35913 854 aa10.21□□□□□ -0.77
RTN4-206ENST00000394611 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
RTN4-206ENST00000394611 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
RTN4-206ENST00000394611 ZNF530Q6P9A1 599 aaPredicted RBP10.21□□□□□ -0.77
RTN4-206ENST00000394611 NUP133Q8WUM0 1156 aa10.21□□□□□ -0.77
RTN4-206ENST00000394611 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.77
RTN4-206ENST00000394611 HSPA4P34932 840 aa10.21□□□□□ -0.78
RTN4-206ENST00000394611 TERF2Q15554 542 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms