RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TXNRD3Q86VQ6 643 aa22.35■■□□□ 1.17
HLA-A-201ENST00000376802 CDCA5Q96FF9 252 aa22.35■■□□□ 1.17
HLA-A-201ENST00000376802 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
HLA-A-201ENST00000376802 MYOZ2Q9NPC6 264 aa22.35■■□□□ 1.17
HLA-A-201ENST00000376802 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
HLA-A-201ENST00000376802 CCDC102AQ96A19 550 aa22.34■■□□□ 1.17
HLA-A-201ENST00000376802 MXD3Q9BW11 206 aa22.34■■□□□ 1.17
HLA-A-201ENST00000376802 VAMP4O75379 141 aa22.33■■□□□ 1.17
HLA-A-201ENST00000376802 CSF1RP07333 972 aa22.33■■□□□ 1.17
HLA-A-201ENST00000376802 ZNF157P51786 506 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-201ENST00000376802 DACT2Q5SW24 774 aa22.33■■□□□ 1.17
HLA-A-201ENST00000376802 AKAP11Q9UKA4 1901 aa22.33■■□□□ 1.17
HLA-A-201ENST00000376802 KIF23Q02241 960 aaPredicted RBP22.32■■□□□ 1.16
HLA-A-201ENST00000376802 DNAAF4Q8WXU2 420 aa22.32■■□□□ 1.16
HLA-A-201ENST00000376802 MRS2Q9HD23 443 aa22.32■■□□□ 1.16
HLA-A-201ENST00000376802 PITPNM2Q9BZ72 1349 aa22.32■■□□□ 1.16
HLA-A-201ENST00000376802 ITGA6P23229 1130 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 FKBP5Q13451 457 aaPredicted RBP22.31■■□□□ 1.16
HLA-A-201ENST00000376802 FAM161AQ3B820 660 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 LINS1Q8NG48 757 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 COA1Q9GZY4 146 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 SCAF8Q9UPN6 1271 aaKnown RBP22.31■■□□□ 1.16
HLA-A-201ENST00000376802 LEMD3Q9Y2U8 911 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 SLC10A3P09131 477 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 KLRK1P26718 216 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 IGHMBP2P38935 993 aaKnown RBP22.31■■□□□ 1.16
HLA-A-201ENST00000376802 NBPF9Q3BBW0 867 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 STRIP1Q5VSL9 837 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
HLA-A-201ENST00000376802 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
HLA-A-201ENST00000376802 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
HLA-A-201ENST00000376802 CCDC85CA6NKD9 419 aa22.3■■□□□ 1.16
HLA-A-201ENST00000376802 MCOLN1Q9GZU1 580 aa22.3■■□□□ 1.16
HLA-A-201ENST00000376802 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
HLA-A-201ENST00000376802 A0A1B0GUL6 1792 aa22.29■■□□□ 1.16
HLA-A-201ENST00000376802 ZNF804BA4D1E1 1349 aa22.29■■□□□ 1.16
HLA-A-201ENST00000376802 EXOSC9Q06265 439 aaKnown RBP22.29■■□□□ 1.16
HLA-A-201ENST00000376802 CSRNP1Q96S65 589 aa22.29■■□□□ 1.16
HLA-A-201ENST00000376802 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
HLA-A-201ENST00000376802 FKBP1BP68106 108 aa22.28■■□□□ 1.16
HLA-A-201ENST00000376802 ANKRD2Q9GZV1 360 aa22.28■■□□□ 1.16
HLA-A-201ENST00000376802 RNF186Q9NXI6 227 aa22.28■■□□□ 1.16
HLA-A-201ENST00000376802 SAGE1Q9NXZ1 904 aa22.28■■□□□ 1.16
HLA-A-201ENST00000376802 WNT10BO00744 389 aa22.27■■□□□ 1.16
HLA-A-201ENST00000376802 FOXO4P98177 505 aa22.27■■□□□ 1.16
HLA-A-201ENST00000376802 PRAMEF18Q5VWM3 479 aa22.27■■□□□ 1.16
HLA-A-201ENST00000376802 RASAL3Q86YV0 1011 aa22.27■■□□□ 1.16
HLA-A-201ENST00000376802 MPHOSPH8Q99549 860 aa22.27■■□□□ 1.16
HLA-A-201ENST00000376802 MYO3BQ8WXR4 1341 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 IRS2Q9Y4H2 1338 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 TRPA1O75762 1119 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 CHRNDQ07001 517 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 MOB2Q70IA6 237 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 OGFOD1Q8N543 542 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 FBXW7Q969H0 707 aa22.26■■□□□ 1.15
HLA-A-201ENST00000376802 F6X3S4 739 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 SNAP23O00161 211 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 RGS19P49795 217 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 DGKZQ13574 1117 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 BEND3Q5T5X7 828 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 TTLL5Q6EMB2 1281 aa22.25■■□□□ 1.15
HLA-A-201ENST00000376802 ANKRD18BA2A2Z9 1011 aa22.23■■□□□ 1.15
HLA-A-201ENST00000376802 UBE2Q2LH0YL09 131 aa22.23■■□□□ 1.15
HLA-A-201ENST00000376802 GTF2IP78347 998 aa22.23■■□□□ 1.15
HLA-A-201ENST00000376802 ZBED3Q96IU2 234 aaPredicted RBP22.23■■□□□ 1.15
HLA-A-201ENST00000376802 CD209Q9NNX6 404 aa22.23■■□□□ 1.15
HLA-A-201ENST00000376802 ANP32CO43423 234 aa22.22■■□□□ 1.15
HLA-A-201ENST00000376802 TAF5LO75529 589 aa22.22■■□□□ 1.15
HLA-A-201ENST00000376802 SASH1O94885 1247 aa22.22■■□□□ 1.15
HLA-A-201ENST00000376802 MMP14P50281 582 aa22.22■■□□□ 1.15
HLA-A-201ENST00000376802 KIAA0825Q8IV33 1275 aa22.22■■□□□ 1.15
HLA-A-201ENST00000376802 HELBQ8NG08 1087 aaPredicted RBP22.22■■□□□ 1.15
HLA-A-201ENST00000376802 EPHA10Q5JZY3 1008 aa22.21■■□□□ 1.15
HLA-A-201ENST00000376802 C15orf52Q6ZUT6 534 aaKnown RBP22.21■■□□□ 1.15
HLA-A-201ENST00000376802 KCNJ4P48050 445 aa22.2■■□□□ 1.14
HLA-A-201ENST00000376802 IFIT5Q13325 482 aaKnown RBP22.2■■□□□ 1.14
HLA-A-201ENST00000376802 REM2Q8IYK8 340 aaPredicted RBP22.2■■□□□ 1.14
HLA-A-201ENST00000376802 CERS5Q8N5B7 392 aa22.2■■□□□ 1.14
HLA-A-201ENST00000376802 ZNF316A6NFI3 1004 aaPredicted RBP22.19■■□□□ 1.14
HLA-A-201ENST00000376802 ECM29Q5VYK3 1845 aa22.18■■□□□ 1.14
HLA-A-201ENST00000376802 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
HLA-A-201ENST00000376802 GRM8O00222 908 aa22.17■■□□□ 1.14
HLA-A-201ENST00000376802 MLLT1Q03111 559 aaPredicted RBP22.17■■□□□ 1.14
HLA-A-201ENST00000376802 ZNF594Q96JF6 807 aaPredicted RBP22.17■■□□□ 1.14
HLA-A-201ENST00000376802 IL1R1P14778 569 aa22.16■■□□□ 1.14
HLA-A-201ENST00000376802 HDAC9Q9UKV0 1011 aa22.16■■□□□ 1.14
HLA-A-201ENST00000376802 CHMP3Q9Y3E7 222 aa22.16■■□□□ 1.14
HLA-A-201ENST00000376802 TNRC18O15417 2968 aaPredicted RBP22.16■■□□□ 1.14
HLA-A-201ENST00000376802 TTLL12Q14166 644 aaPredicted RBP22.15■■□□□ 1.14
HLA-A-201ENST00000376802 APOBEC3FQ8IUX4 373 aaKnown RBP22.15■■□□□ 1.14
HLA-A-201ENST00000376802 PCDHAC2Q9Y5I4 1007 aa22.15■■□□□ 1.14
HLA-A-201ENST00000376802 TM4SF4P48230 202 aa22.14■■□□□ 1.14
HLA-A-201ENST00000376802 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.14
HLA-A-201ENST00000376802 LDHAL6AQ6ZMR3 332 aa22.14■■□□□ 1.14
HLA-A-201ENST00000376802 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.14
HLA-A-201ENST00000376802 MTMR14Q8NCE2 650 aa22.14■■□□□ 1.14
HLA-A-201ENST00000376802 NF2P35240 595 aa22.13■■□□□ 1.13
HLA-A-201ENST00000376802 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
HLA-A-201ENST00000376802 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
HLA-A-201ENST00000376802 LDLRAD1Q5T700 205 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms