RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 LRSAM1Q6UWE0 723 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 Q6ZUG5 572 aa24.02■■□□□ 1.44
VSX1-202ENST00000376709 PDE8AO60658 829 aa24.01■■□□□ 1.43
VSX1-202ENST00000376709 HMGB1P09429 215 aaKnown RBP24.01■■□□□ 1.43
VSX1-202ENST00000376709 HSP90B1P14625 803 aaKnown RBP24.01■■□□□ 1.43
VSX1-202ENST00000376709 FIBPO43427 364 aa24■■□□□ 1.43
VSX1-202ENST00000376709 ZNF34Q8IZ26 560 aa24■■□□□ 1.43
VSX1-202ENST00000376709 M0R2C6 588 aa23.99■■□□□ 1.43
VSX1-202ENST00000376709 ZFYP08048 801 aaPredicted RBP23.99■■□□□ 1.43
VSX1-202ENST00000376709 SCARF1Q14162 830 aa23.99■■□□□ 1.43
VSX1-202ENST00000376709 LAMA4Q16363 1823 aa23.99■■□□□ 1.43
VSX1-202ENST00000376709 WASHC4Q2M389 1173 aa23.99■■□□□ 1.43
VSX1-202ENST00000376709 STOX1Q6ZVD7 989 aa23.99■■□□□ 1.43
VSX1-202ENST00000376709 CSPP1Q1MSJ5 1256 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 OSBP2Q969R2 916 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 TRIM44Q96DX7 344 aaPredicted RBP23.98■■□□□ 1.43
VSX1-202ENST00000376709 RBSNQ9H1K0 784 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 RREB1Q92766 1687 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 ABCC12Q96J65 1359 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 ZAP70P43403 619 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 DNM1Q05193 864 aaKnown RBP23.98■■□□□ 1.43
VSX1-202ENST00000376709 SMARCC1Q92922 1105 aaPredicted RBP23.98■■□□□ 1.43
VSX1-202ENST00000376709 GTF3C6Q969F1 213 aa23.98■■□□□ 1.43
VSX1-202ENST00000376709 MYH14Q7Z406 1995 aaKnown RBP23.97■■□□□ 1.43
VSX1-202ENST00000376709 PHF14O94880 888 aa23.97■■□□□ 1.43
VSX1-202ENST00000376709 CCDC173Q0VFZ6 552 aa23.97■■□□□ 1.43
VSX1-202ENST00000376709 DHX32Q7L7V1 743 aaKnown RBP23.97■■□□□ 1.43
VSX1-202ENST00000376709 BRF1Q92994 677 aa23.97■■□□□ 1.43
VSX1-202ENST00000376709 LRRC2Q9BYS8 371 aa23.97■■□□□ 1.43
VSX1-202ENST00000376709 UBE2HP62256 183 aa23.96■■□□□ 1.43
VSX1-202ENST00000376709 TPRNQ4KMQ1 711 aa23.96■■□□□ 1.43
VSX1-202ENST00000376709 FNBP4Q8N3X1 1017 aaPredicted RBP23.96■■□□□ 1.43
VSX1-202ENST00000376709 CICQ96RK0 1608 aaPredicted RBP23.96■■□□□ 1.43
VSX1-202ENST00000376709 PI16Q6UXB8 463 aa23.96■■□□□ 1.43
VSX1-202ENST00000376709 CDC37L1Q7L3B6 337 aa23.96■■□□□ 1.43
VSX1-202ENST00000376709 FAM177BA6PVY3 158 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 CAMTA2O94983 1202 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 MYH7P12883 1935 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 E7EWF7 191 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 PDE8BO95263 885 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 SUSD4Q5VX71 490 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 USP21Q9UK80 565 aa23.95■■□□□ 1.42
VSX1-202ENST00000376709 FERMT3Q86UX7 667 aa23.94■■□□□ 1.42
VSX1-202ENST00000376709 VGLL2Q8N8G2 317 aa23.94■■□□□ 1.42
VSX1-202ENST00000376709 MCAMP43121 646 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 APPBP2Q92624 585 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 AK7Q96M32 723 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.93■■□□□ 1.42
VSX1-202ENST00000376709 A0A0G2JLW4 131 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 PTF1AQ7RTS3 328 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 CTNNA3Q9UI47 895 aa23.93■■□□□ 1.42
VSX1-202ENST00000376709 KCNQ4P56696 695 aa23.92■■□□□ 1.42
VSX1-202ENST00000376709 JAK2O60674 1132 aa23.92■■□□□ 1.42
VSX1-202ENST00000376709 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
VSX1-202ENST00000376709 TTLL5Q6EMB2 1281 aa23.92■■□□□ 1.42
VSX1-202ENST00000376709 LINC00116Q8NCU8 138 aa23.92■■□□□ 1.42
VSX1-202ENST00000376709 AKAP11Q9UKA4 1901 aa23.92■■□□□ 1.42
VSX1-202ENST00000376709 COL5A3P25940 1745 aaPredicted RBP23.91■■□□□ 1.42
VSX1-202ENST00000376709 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 KRT85P78386 507 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 ZNF512BQ96KM6 892 aaPredicted RBP23.91■■□□□ 1.42
VSX1-202ENST00000376709 PPP1R9BQ96SB3 815 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 UTP14AQ9BVJ6 771 aaKnown RBP23.91■■□□□ 1.42
VSX1-202ENST00000376709 MROH5Q6ZUA9 1318 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 EXOSC10Q01780 885 aaKnown RBP23.91■■□□□ 1.42
VSX1-202ENST00000376709 CCDC183Q5T5S1 534 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 PUS7LQ9H0K6 701 aaKnown RBP23.91■■□□□ 1.42
VSX1-202ENST00000376709 TSPY26PQ9H489 355 aa23.91■■□□□ 1.42
VSX1-202ENST00000376709 SCRN1Q12765 414 aa23.9■■□□□ 1.42
VSX1-202ENST00000376709 TTF1Q15361 905 aaPredicted RBP23.9■■□□□ 1.42
VSX1-202ENST00000376709 PUM3Q15397 648 aaKnown RBP23.9■■□□□ 1.42
VSX1-202ENST00000376709 IMMTQ16891 758 aaKnown RBP23.9■■□□□ 1.42
VSX1-202ENST00000376709 ZSCAN25Q6NSZ9 544 aa23.9■■□□□ 1.42
VSX1-202ENST00000376709 APOBRQ0VD83 1088 aa23.89■■□□□ 1.42
VSX1-202ENST00000376709 PFKFB2O60825 505 aa23.89■■□□□ 1.41
VSX1-202ENST00000376709 NIP7Q9Y221 180 aaKnown RBP eCLIP23.89■■□□□ 1.41
VSX1-202ENST00000376709 LRP5O75197 1615 aa23.89■■□□□ 1.41
VSX1-202ENST00000376709 PARP10Q53GL7 1025 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 CCDC102BQ68D86 513 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 FAM184AQ8NB25 1140 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 HELBQ8NG08 1087 aaPredicted RBP23.88■■□□□ 1.41
VSX1-202ENST00000376709 LPIN2Q92539 896 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 DDX11Q96FC9 970 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 MPHOSPH8Q99549 860 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 AGXT2Q9BYV1 514 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 GPAA1O43292 621 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 HAND2P61296 217 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 SLC9C2Q5TAH2 1124 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 RNF214Q8ND24 703 aa23.88■■□□□ 1.41
VSX1-202ENST00000376709 LLPHQ9BRT6 129 aaKnown RBP23.88■■□□□ 1.41
VSX1-202ENST00000376709 NAP1L2Q9ULW6 460 aaPredicted RBP23.88■■□□□ 1.41
VSX1-202ENST00000376709 FOXP2O15409 715 aa23.87■■□□□ 1.41
VSX1-202ENST00000376709 FGAP02671 866 aa23.87■■□□□ 1.41
VSX1-202ENST00000376709 PHKA1P46020 1223 aa23.87■■□□□ 1.41
VSX1-202ENST00000376709 FAM173BQ6P4H8 233 aa23.87■■□□□ 1.41
VSX1-202ENST00000376709 CHST3Q7LGC8 479 aa23.87■■□□□ 1.41
VSX1-202ENST00000376709 H3BQV1 296 aa23.86■■□□□ 1.41
VSX1-202ENST00000376709 IDH1O75874 414 aaKnown RBP23.86■■□□□ 1.41
VSX1-202ENST00000376709 UQCRFS1P1P0C7P4 283 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms